BLASTX nr result

ID: Scutellaria24_contig00026693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026693
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containi...    73   2e-11
ref|XP_002527905.1| pentatricopeptide repeat-containing protein,...    65   6e-09
ref|NP_176276.1| pentatricopeptide repeat-containing protein [Ar...    64   1e-08
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_002886593.1| pentatricopeptide repeat-containing protein ...    64   1e-08

>ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g60770-like [Cucumis sativus]
           gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY
           PROTEIN: pentatricopeptide repeat-containing protein
           At1g60770-like [Cucumis sativus]
          Length = 489

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/49 (69%), Positives = 40/49 (81%)
 Frame = +3

Query: 201 FSNGGEEKNVRTELNQFIKSHKNAYKWEVGHTLKILRRRKLYAPALKLS 347
           F +GG EK+VR +LN+FIKSHK  +KWEVG TL+ LR RKLY PALKLS
Sbjct: 32  FKDGGSEKSVRLQLNKFIKSHKRVFKWEVGDTLRKLRDRKLYYPALKLS 80


>ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532680|gb|EEF34462.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 490

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/49 (65%), Positives = 34/49 (69%)
 Frame = +3

Query: 201 FSNGGEEKNVRTELNQFIKSHKNAYKWEVGHTLKILRRRKLYAPALKLS 347
           F  G  E  VR +LNQF+KS K  YKWEVG TLK LR R LY PALKLS
Sbjct: 30  FKEGSSEVKVREQLNQFLKSSKRVYKWEVGDTLKKLRSRGLYYPALKLS 78


>ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75097554|sp|O22714.1|PPR86_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g60770 gi|2462744|gb|AAB71963.1| Hypothetical protein
           [Arabidopsis thaliana] gi|27754491|gb|AAO22693.1|
           unknown protein [Arabidopsis thaliana]
           gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis
           thaliana] gi|332195609|gb|AEE33730.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 491

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = +3

Query: 201 FSNGGEEKNVRTELNQFIKSHKNAYKWEVGHTLKILRRRKLYAPALKLS 347
           F +GG E  VR +LNQF+K  K+ +KWEVG T+K LR R LY PALKLS
Sbjct: 30  FKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLS 78


>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g60770-like [Glycine max]
          Length = 490

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/49 (63%), Positives = 34/49 (69%)
 Frame = +3

Query: 201 FSNGGEEKNVRTELNQFIKSHKNAYKWEVGHTLKILRRRKLYAPALKLS 347
           F +G  +  VR  LN F+KS K  YKWEVG TLK LR RKLY PALKLS
Sbjct: 30  FKDGSSQLIVRQSLNNFVKSRKRVYKWEVGDTLKKLRDRKLYQPALKLS 78


>ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297332434|gb|EFH62852.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 491

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = +3

Query: 201 FSNGGEEKNVRTELNQFIKSHKNAYKWEVGHTLKILRRRKLYAPALKLS 347
           F +GG E  VR +LNQF+K  K+ +KWEVG T+K LR R LY PALKLS
Sbjct: 30  FKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLS 78


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