BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026666
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...   231   4e-59
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...   231   6e-59
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ...   216   2e-54
ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              213   2e-53

>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic;
           AltName: Full=NictaRpoT3-tom; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3B;
           Flags: Precursor gi|21425667|emb|CAC95021.2| chloroplast
           RNA polymerase [Nicotiana tabacum]
          Length = 977

 Score =  231 bits (590), Expect = 4e-59
 Identities = 108/151 (71%), Positives = 135/151 (89%)
 Frame = -1

Query: 453 KKHRTKEFESESQEDASKEAAILRQRVKSLIRKNRVIEVQKLVRSEEYKSWGRDTQAKLG 274
           +KH T    ++SQED SKE  ILR+RVKSLI++NRV+EV+KL++SEE +SWGRDTQAKLG
Sbjct: 275 QKHMTG---AQSQEDMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLG 331

Query: 273 CCLIELLIQSAYVQPPVNQSADYPPDVRPAFRHIFKMAAKEPGQNLVKKYGVIECDPLVL 94
           C L+ELL ++AYVQ PV+QSAD PPD+RPAFRH+FK+A ++PG+N+VKKYGVIECDPLV+
Sbjct: 332 CRLLELLTETAYVQRPVDQSADTPPDIRPAFRHVFKIATRDPGKNIVKKYGVIECDPLVV 391

Query: 93  DGLDKTVKHMIIPYVPMLVPPKKWKGYDKGG 1
            G+D+TVK M+IPYVPMLVPPKKW+GYDKGG
Sbjct: 392 AGVDRTVKQMMIPYVPMLVPPKKWRGYDKGG 422


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic;
           AltName: Full=NsRpoT-C; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3;
           Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC
           RecName: Full=DNA-directed RNA polymerase 3A,
           chloroplastic; AltName: Full=NictaRpoT3-syl; AltName:
           Full=T7 bacteriophage-type single subunit RNA polymerase
           3A; Flags: Precursor gi|21425641|emb|CAC82576.3|
           phage-type RNA polymerase [Nicotiana sylvestris]
           gi|21425679|emb|CAC95027.2| plastid RNA polymerase
           [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 977

 Score =  231 bits (588), Expect = 6e-59
 Identities = 106/151 (70%), Positives = 136/151 (90%)
 Frame = -1

Query: 453 KKHRTKEFESESQEDASKEAAILRQRVKSLIRKNRVIEVQKLVRSEEYKSWGRDTQAKLG 274
           +KH T    ++SQED S+E  ILR+RVKSLI++NRV+EV+KL++SEE +SWGRDTQAKLG
Sbjct: 276 QKHMTG---AQSQEDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLG 332

Query: 273 CCLIELLIQSAYVQPPVNQSADYPPDVRPAFRHIFKMAAKEPGQNLVKKYGVIECDPLVL 94
           C L+ELL ++AYVQPPV+QSAD PPD+RPAFRH+F++A ++PG+++VKKYGVIECDPLV+
Sbjct: 333 CRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLVV 392

Query: 93  DGLDKTVKHMIIPYVPMLVPPKKWKGYDKGG 1
            G+D+TVK M+IPYVPMLVPPKKW+GYDKGG
Sbjct: 393 AGVDRTVKQMMIPYVPMLVPPKKWRGYDKGG 423


>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
           [Ricinus communis] gi|223532193|gb|EEF33998.1|
           DNA-directed RNA polymerase 3B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 1000

 Score =  216 bits (549), Expect = 2e-54
 Identities = 103/151 (68%), Positives = 123/151 (81%)
 Frame = -1

Query: 453 KKHRTKEFESESQEDASKEAAILRQRVKSLIRKNRVIEVQKLVRSEEYKSWGRDTQAKLG 274
           K ++ K+  S +QE   KE  ILR+RV SLIR+ ++IEVQKLV++EE K WGRDTQAKLG
Sbjct: 282 KNYQRKKTISGAQESLGKEKEILRKRVNSLIRRKKLIEVQKLVKNEEMKPWGRDTQAKLG 341

Query: 273 CCLIELLIQSAYVQPPVNQSADYPPDVRPAFRHIFKMAAKEPGQNLVKKYGVIECDPLVL 94
             LIELL ++A+VQPPVNQSAD PPDVRPAFRH F++    PGQ +VKKYGVIEC+PLVL
Sbjct: 342 SRLIELLTETAFVQPPVNQSADVPPDVRPAFRHRFRIVKNNPGQKIVKKYGVIECNPLVL 401

Query: 93  DGLDKTVKHMIIPYVPMLVPPKKWKGYDKGG 1
            GLD + KHM+IPY PMLVPPKKWKGY+KGG
Sbjct: 402 KGLDGSAKHMLIPYFPMLVPPKKWKGYNKGG 432


>ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1|
           predicted protein [Populus trichocarpa]
          Length = 882

 Score =  216 bits (549), Expect = 2e-54
 Identities = 103/151 (68%), Positives = 118/151 (78%)
 Frame = -1

Query: 453 KKHRTKEFESESQEDASKEAAILRQRVKSLIRKNRVIEVQKLVRSEEYKSWGRDTQAKLG 274
           K ++ K+   E QE   KE  +LR+RV SLIR+ R++EVQ LV+ +E K W R TQAKLG
Sbjct: 177 KNYQRKKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWSRGTQAKLG 236

Query: 273 CCLIELLIQSAYVQPPVNQSADYPPDVRPAFRHIFKMAAKEPGQNLVKKYGVIECDPLVL 94
             LIELL ++AYVQPPVNQS D PPDVRPAFRHIFK   K PGQ +VKKYGVIECDPL+L
Sbjct: 237 SRLIELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLIL 296

Query: 93  DGLDKTVKHMIIPYVPMLVPPKKWKGYDKGG 1
            GLD T KHM+IPY PMLVPPKKWKGYDKGG
Sbjct: 297 TGLDGTAKHMLIPYFPMLVPPKKWKGYDKGG 327


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  213 bits (541), Expect = 2e-53
 Identities = 104/152 (68%), Positives = 119/152 (78%), Gaps = 4/152 (2%)
 Frame = -1

Query: 444 RTKEFESES----QEDASKEAAILRQRVKSLIRKNRVIEVQKLVRSEEYKSWGRDTQAKL 277
           +TK FE        ++  +E  ILR+RVKS IRK ++IEVQKLV++EE   WGRDTQAKL
Sbjct: 102 KTKNFERHKTVGHSQEGLREKEILRKRVKSFIRKKKIIEVQKLVKNEEITPWGRDTQAKL 161

Query: 276 GCCLIELLIQSAYVQPPVNQSADYPPDVRPAFRHIFKMAAKEPGQNLVKKYGVIECDPLV 97
           G  LIELL ++AYVQ PVNQSAD PPDVRPAFRH FK   KE GQ   +KYGVIECDPLV
Sbjct: 162 GSRLIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLV 221

Query: 96  LDGLDKTVKHMIIPYVPMLVPPKKWKGYDKGG 1
           L GLD+T KHM+IPYVPML+PPKKWKGYDKGG
Sbjct: 222 LIGLDRTAKHMVIPYVPMLIPPKKWKGYDKGG 253