BLASTX nr result

ID: Scutellaria24_contig00026433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026433
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25589.3| unnamed protein product [Vitis vinifera]              210   1e-52
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   210   1e-52
ref|XP_003542669.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   209   2e-52
ref|XP_003549705.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   206   2e-51
ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein co...   204   5e-51

>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  210 bits (534), Expect = 1e-52
 Identities = 104/110 (94%), Positives = 106/110 (96%)
 Frame = -2

Query: 331 DSSTYVSTQFLLGLMSNPTLVRNVALVGHLQCGKTTFMDMLVEQTHHISTFDQSSEKHMR 152
           DSSTYVSTQFLLGLMSNP LVRNVALVGHLQ GKT FMDMLVEQTHHISTFD +SEKHMR
Sbjct: 62  DSSTYVSTQFLLGLMSNPALVRNVALVGHLQHGKTLFMDMLVEQTHHISTFDSNSEKHMR 121

Query: 151 YTDTRIDEQERKISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT 2
           YTDTRIDEQER+ISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT
Sbjct: 122 YTDTRIDEQERRISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT 171


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
           [Vitis vinifera] gi|147858113|emb|CAN81413.1|
           hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  210 bits (534), Expect = 1e-52
 Identities = 104/110 (94%), Positives = 106/110 (96%)
 Frame = -2

Query: 331 DSSTYVSTQFLLGLMSNPTLVRNVALVGHLQCGKTTFMDMLVEQTHHISTFDQSSEKHMR 152
           DSSTYVSTQFLLGLMSNP LVRNVALVGHLQ GKT FMDMLVEQTHHISTFD +SEKHMR
Sbjct: 119 DSSTYVSTQFLLGLMSNPALVRNVALVGHLQHGKTLFMDMLVEQTHHISTFDSNSEKHMR 178

Query: 151 YTDTRIDEQERKISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT 2
           YTDTRIDEQER+ISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT
Sbjct: 179 YTDTRIDEQERRISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT 228


>ref|XP_003542669.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Glycine max]
          Length = 986

 Score =  209 bits (532), Expect = 2e-52
 Identities = 103/110 (93%), Positives = 106/110 (96%)
 Frame = -2

Query: 331 DSSTYVSTQFLLGLMSNPTLVRNVALVGHLQCGKTTFMDMLVEQTHHISTFDQSSEKHMR 152
           DSSTYVS+QFLLGLMSNPTLVRNVALVGHLQ GKT FMDMLVEQTHH+STFD  SEKHMR
Sbjct: 117 DSSTYVSSQFLLGLMSNPTLVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFDSQSEKHMR 176

Query: 151 YTDTRIDEQERKISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT 2
           YTDTRIDEQER+ISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT
Sbjct: 177 YTDTRIDEQERRISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT 226


>ref|XP_003549705.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
           component-like [Glycine max]
          Length = 988

 Score =  206 bits (524), Expect = 2e-51
 Identities = 101/110 (91%), Positives = 106/110 (96%)
 Frame = -2

Query: 331 DSSTYVSTQFLLGLMSNPTLVRNVALVGHLQCGKTTFMDMLVEQTHHISTFDQSSEKHMR 152
           DSSTYVS+QFLLGLMSNPTLVRNVALVG+LQ GKT FMDMLVEQTHH+STFD  SEKHMR
Sbjct: 119 DSSTYVSSQFLLGLMSNPTLVRNVALVGNLQHGKTVFMDMLVEQTHHMSTFDSQSEKHMR 178

Query: 151 YTDTRIDEQERKISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT 2
           YTDTRIDEQER+ISIKA+PMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT
Sbjct: 179 YTDTRIDEQERRISIKAIPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT 228


>ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein component, putative
           [Ricinus communis] gi|223527776|gb|EEF29877.1| 116 kD U5
           small nuclear ribonucleoprotein component, putative
           [Ricinus communis]
          Length = 992

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/110 (90%), Positives = 106/110 (96%)
 Frame = -2

Query: 331 DSSTYVSTQFLLGLMSNPTLVRNVALVGHLQCGKTTFMDMLVEQTHHISTFDQSSEKHMR 152
           DSSTYVS+QFL+GLMSNP+LVRNVALVGHLQ GKT FMDMLVEQTHH+ TFD +SEKHMR
Sbjct: 122 DSSTYVSSQFLVGLMSNPSLVRNVALVGHLQHGKTLFMDMLVEQTHHMPTFDMNSEKHMR 181

Query: 151 YTDTRIDEQERKISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT 2
           YTDTRIDEQER+ISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT
Sbjct: 182 YTDTRIDEQERRISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMT 231


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