BLASTX nr result

ID: Scutellaria24_contig00026376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026376
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]    98   6e-19
ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...    92   3e-17
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    89   4e-16
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi...    89   4e-16

>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/112 (41%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = +2

Query: 2    ELIKEYCELRQYHKAIDLTNDMTQLGLQISSFIGNVFLLHALRTRKVYSAWVYSSHTQN- 178
            EL+K  C+ ++Y   ++L +D+ ++G  +SSFIGNV LLH+L+T +++  WV++    N 
Sbjct: 707  ELVKVLCKNKRYDVVVNLIDDLERVGRHVSSFIGNVLLLHSLKTPELFETWVHAKDAHNE 766

Query: 179  LTPVCWILGHLIGVFSDSVEGIHDGEELVKLIQQCFDLDIYTYNLVLRRLSK 334
            ++    ILG LIG FS  +    D   L +++QQCF LD+YTYN++LRRL++
Sbjct: 767  ISSPNLILGQLIGEFSGCIGVNQDFNYLEEVMQQCFPLDLYTYNMLLRRLTR 818


>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Vitis vinifera]
          Length = 881

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/112 (41%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
 Frame = +2

Query: 2    ELIKEYCELRQYHKAIDLTNDMTQLGLQISSFIGNVFLLHALRTRKVYSAWVYSSHTQN- 178
            EL+K  C  ++Y   ++L +D+ ++G  +SSFIGNV LLH+L+T +++  WV++    N 
Sbjct: 707  ELVKVLCTNKRYDVVVNLIDDLERVGRHVSSFIGNVLLLHSLKTPELFETWVHAKDAHNE 766

Query: 179  LTPVCWILGHLIGVFSDSVEGIHDGEELVKLIQQCFDLDIYTYNLVLRRLSK 334
            ++    ILG LIG FS  +    D   L +++QQCF LD+YTYN++LRRL++
Sbjct: 767  ISSPNLILGQLIGEFSGCIGVNQDFNYLEEVMQQCFPLDLYTYNMLLRRLTR 818


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/110 (40%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
 Frame = +2

Query: 5    LIKEYCELRQYHKAIDLTNDMTQLGLQISSFIGNVFLLHALRTRKVYSAWVYSSHTQNLT 184
            LI   C  ++Y  AI L  D+ + G +++SFIGN+ LLH+L++ ++Y AW+     QN T
Sbjct: 722  LIMLLCSNKRYSTAITLITDLEKFGRRVTSFIGNILLLHSLKSDELYDAWLQVREVQNET 781

Query: 185  PV-CWILGHLIGVFSDSVEGIHDGEELVKLIQQCFDLDIYTYNLVLRRLS 331
             +   ILG +IG F+  ++     + L ++I+QCF LD+YTYN+++RRLS
Sbjct: 782  SLNLLILGQIIGAFAGRLKLSQQIDNLEEVIEQCFPLDLYTYNMLMRRLS 831


>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g71210-like, partial [Cucumis sativus]
          Length = 889

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/109 (42%), Positives = 67/109 (61%)
 Frame = +2

Query: 2    ELIKEYCELRQYHKAIDLTNDMTQLGLQISSFIGNVFLLHALRTRKVYSAWVYSSHTQNL 181
            EL K +C+  +Y   ++L ND+ ++G  ++SF+GNV L  +L+T+K+Y AWV S   Q  
Sbjct: 707  ELAKHFCQNERYDAVVNLLNDLDKVGRPLTSFLGNVLLYSSLKTQKLYKAWVNSRVGQVE 766

Query: 182  TPVCWILGHLIGVFSDSVEGIHDGEELVKLIQQCFDLDIYTYNLVLRRL 328
            T    +LG LI  FS  +      + L + I +CF LDIYTYNL+LR L
Sbjct: 767  TSQSSMLGLLIKAFSGHIRVSQSIKNLEEAIAKCFPLDIYTYNLLLRTL 815


>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Cucumis sativus]
          Length = 913

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/109 (42%), Positives = 67/109 (61%)
 Frame = +2

Query: 2    ELIKEYCELRQYHKAIDLTNDMTQLGLQISSFIGNVFLLHALRTRKVYSAWVYSSHTQNL 181
            EL K +C+  +Y   ++L ND+ ++G  ++SF+GNV L  +L+T+K+Y AWV S   Q  
Sbjct: 731  ELAKHFCQNERYDAVVNLLNDLDKVGRPLTSFLGNVLLYSSLKTQKLYKAWVNSRVGQVE 790

Query: 182  TPVCWILGHLIGVFSDSVEGIHDGEELVKLIQQCFDLDIYTYNLVLRRL 328
            T    +LG LI  FS  +      + L + I +CF LDIYTYNL+LR L
Sbjct: 791  TSQSSMLGLLIKAFSGHIRVSQSIKNLEEAIAKCFPLDIYTYNLLLRTL 839


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