BLASTX nr result

ID: Scutellaria24_contig00026349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026349
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307356.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...    73   3e-11
gb|AFW73525.1| putative RING zinc finger domain superfamily prot...    72   6e-11
gb|AFW73524.1| putative RING zinc finger domain superfamily prot...    72   6e-11
ref|XP_003534006.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    72   6e-11

>ref|XP_002307356.1| predicted protein [Populus trichocarpa] gi|222856805|gb|EEE94352.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 31/57 (54%), Positives = 41/57 (71%)
 Frame = -2

Query: 330 LRLLPKCNHIFHPECVGAWLKFHITCPVCRANLDPLAGHEPVRATQPWHTNDMESEL 160
           LRL+PKC+H+FHP+C+ AWL  H+TCPVCRANL P  G  P     P H +D +++L
Sbjct: 156 LRLIPKCSHVFHPDCIDAWLTSHVTCPVCRANLVPKPGDLPF---NPVHVDDPKNDL 209


>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
           gi|223548304|gb|EEF49795.1| ring finger protein,
           putative [Ricinus communis]
          Length = 380

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 30/58 (51%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
 Frame = -2

Query: 330 LRLLPKCNHIFHPECVGAWLKFHITCPVCRANLDPLAGHEPVRATQ--PWHTNDMESE 163
           LRLLPKC+H+FHP+C+ AWL  H TCPVCR+NL P     P + T+  P  ++D+E++
Sbjct: 136 LRLLPKCDHVFHPDCIDAWLASHTTCPVCRSNLTPQPVDPPTQTTESLPDSSSDLEAQ 193


>gb|AFW73525.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 419

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -2

Query: 330 LRLLPKCNHIFHPECVGAWLKFHITCPVCRANLDP 226
           LRLLPKC+H FHPEC+G WL  H+TCPVCR NLDP
Sbjct: 139 LRLLPKCSHAFHPECIGEWLASHVTCPVCRCNLDP 173


>gb|AFW73524.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 502

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -2

Query: 330 LRLLPKCNHIFHPECVGAWLKFHITCPVCRANLDP 226
           LRLLPKC+H FHPEC+G WL  H+TCPVCR NLDP
Sbjct: 139 LRLLPKCSHAFHPECIGEWLASHVTCPVCRCNLDP 173


>ref|XP_003534006.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 362

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = -2

Query: 330 LRLLPKCNHIFHPECVGAWLKFHITCPVCRANLDPLAGHEPVRATQPWHTND 175
           LRLLPKCNH+FHP C+ +WL  H+TCPVCRANL   + H  V  T P H  +
Sbjct: 140 LRLLPKCNHVFHPHCIDSWLACHVTCPVCRANLSQESSH--VSITVPPHNEE 189


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