BLASTX nr result

ID: Scutellaria24_contig00026314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026314
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303629.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_003611014.1| Pre-mRNA-splicing factor CLF1 [Medicago trun...   188   4e-46
ref|XP_002509927.1| crooked neck protein, putative [Ricinus comm...   188   4e-46
ref|XP_002299492.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46
ref|XP_003620819.1| Pre-mRNA-splicing factor CLF1 [Medicago trun...   186   1e-45

>ref|XP_002303629.1| predicted protein [Populus trichocarpa] gi|222841061|gb|EEE78608.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score =  189 bits (480), Expect = 2e-46
 Identities = 92/123 (74%), Positives = 100/123 (81%)
 Frame = +2

Query: 23  MSNGRESDPSLGYLTKKETEVKLPRPTRVKNKTPASIQITXXXXXXXXXXXXXXXXXPPK 202
           M++ ++ DPSLGYLT+K+TEVKLPRPTRVKNKTPA IQIT                 PPK
Sbjct: 1   MASNKDGDPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEADIRPPK 60

Query: 203 QKITDSIELGDYRLRKRKEFEDLIRRVRWNKSVWVKYAKWEESQKDFARARSVWERALEV 382
           QKITDS ELGDYRLRKRKEFEDLIRRVRWN SVW+KYA+WEESQKDF RARSVWERALEV
Sbjct: 61  QKITDSTELGDYRLRKRKEFEDLIRRVRWNISVWIKYAQWEESQKDFNRARSVWERALEV 120

Query: 383 DYR 391
           DYR
Sbjct: 121 DYR 123


>ref|XP_003611014.1| Pre-mRNA-splicing factor CLF1 [Medicago truncatula]
           gi|355512349|gb|AES93972.1| Pre-mRNA-splicing factor
           CLF1 [Medicago truncatula]
          Length = 693

 Score =  188 bits (477), Expect = 4e-46
 Identities = 90/123 (73%), Positives = 101/123 (82%)
 Frame = +2

Query: 23  MSNGRESDPSLGYLTKKETEVKLPRPTRVKNKTPASIQITXXXXXXXXXXXXXXXXXPPK 202
           MS+ +++DP+LGYLT+K+TEVKLPRPTRVKNKTPA IQIT                 PPK
Sbjct: 1   MSSSKDADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK 60

Query: 203 QKITDSIELGDYRLRKRKEFEDLIRRVRWNKSVWVKYAKWEESQKDFARARSVWERALEV 382
           QKITDS ELG+YRLRKRKEFEDLIRRVRWN SVW+KYA+WEESQKDF RARSVWERALEV
Sbjct: 61  QKITDSTELGEYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFTRARSVWERALEV 120

Query: 383 DYR 391
           DY+
Sbjct: 121 DYK 123


>ref|XP_002509927.1| crooked neck protein, putative [Ricinus communis]
           gi|223549826|gb|EEF51314.1| crooked neck protein,
           putative [Ricinus communis]
          Length = 696

 Score =  188 bits (477), Expect = 4e-46
 Identities = 92/123 (74%), Positives = 100/123 (81%)
 Frame = +2

Query: 23  MSNGRESDPSLGYLTKKETEVKLPRPTRVKNKTPASIQITXXXXXXXXXXXXXXXXXPPK 202
           MS+ +++DPSLGYLT+K+TEVKLPRPTRVKNKTPA IQIT                 PPK
Sbjct: 1   MSSAKDADPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK 60

Query: 203 QKITDSIELGDYRLRKRKEFEDLIRRVRWNKSVWVKYAKWEESQKDFARARSVWERALEV 382
           QKITDS EL DYRLRKRKEFEDLIRRVRWN SVW+KYA+WEESQKDF RARSVWERALEV
Sbjct: 61  QKITDSSELADYRLRKRKEFEDLIRRVRWNISVWIKYAQWEESQKDFNRARSVWERALEV 120

Query: 383 DYR 391
           DYR
Sbjct: 121 DYR 123


>ref|XP_002299492.1| predicted protein [Populus trichocarpa] gi|222846750|gb|EEE84297.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score =  188 bits (477), Expect = 4e-46
 Identities = 92/123 (74%), Positives = 99/123 (80%)
 Frame = +2

Query: 23  MSNGRESDPSLGYLTKKETEVKLPRPTRVKNKTPASIQITXXXXXXXXXXXXXXXXXPPK 202
           M++ R+ DPSLGYLT+K+TEVKLPRPTRVKNKTPA IQIT                 PPK
Sbjct: 1   MASNRDGDPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK 60

Query: 203 QKITDSIELGDYRLRKRKEFEDLIRRVRWNKSVWVKYAKWEESQKDFARARSVWERALEV 382
           QKITDS EL DYRLRKRKEFEDLIRRVRWN SVW+KYA+WEESQKDF RARSVWERALEV
Sbjct: 61  QKITDSTELADYRLRKRKEFEDLIRRVRWNISVWIKYAQWEESQKDFNRARSVWERALEV 120

Query: 383 DYR 391
           DYR
Sbjct: 121 DYR 123


>ref|XP_003620819.1| Pre-mRNA-splicing factor CLF1 [Medicago truncatula]
           gi|357501261|ref|XP_003620919.1| Pre-mRNA-splicing
           factor CLF1 [Medicago truncatula]
           gi|355495834|gb|AES77037.1| Pre-mRNA-splicing factor
           CLF1 [Medicago truncatula] gi|355495934|gb|AES77137.1|
           Pre-mRNA-splicing factor CLF1 [Medicago truncatula]
          Length = 695

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/123 (73%), Positives = 100/123 (81%)
 Frame = +2

Query: 23  MSNGRESDPSLGYLTKKETEVKLPRPTRVKNKTPASIQITXXXXXXXXXXXXXXXXXPPK 202
           MS+ + +DP+LGYLT+K+TEVKLPRPTRVKNKTPA IQIT                 PPK
Sbjct: 1   MSSSKVADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK 60

Query: 203 QKITDSIELGDYRLRKRKEFEDLIRRVRWNKSVWVKYAKWEESQKDFARARSVWERALEV 382
           QKITDS ELG+YRLRKRKEFEDLIRRVRWN SVW+KYA+WEESQKDF RARSVWERALEV
Sbjct: 61  QKITDSTELGEYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFTRARSVWERALEV 120

Query: 383 DYR 391
           DY+
Sbjct: 121 DYK 123


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