BLASTX nr result

ID: Scutellaria24_contig00026294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026294
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37733.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vin...    71   8e-11
emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]    71   8e-11
gb|ABO28526.1| glutamate receptor [Malus hupehensis]                   67   2e-09
ref|XP_002313575.1| glutamate-gated kainate-type ion channel rec...    66   3e-09

>emb|CBI37733.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/44 (77%), Positives = 40/44 (90%)
 Frame = +1

Query: 184 SPDDVNIGAIFSFKTINGKVSKIGMEAAVEDVNSDPSILGGRKL 315
           +P+ VNIGAIF+F TINGKV+KI M+AA +DVNSDPSILGGRKL
Sbjct: 253 NPEVVNIGAIFTFSTINGKVAKIAMKAAEQDVNSDPSILGGRKL 296


>ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vinifera]
          Length = 917

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/44 (77%), Positives = 40/44 (90%)
 Frame = +1

Query: 184 SPDDVNIGAIFSFKTINGKVSKIGMEAAVEDVNSDPSILGGRKL 315
           +P+ VNIGAIF+F TINGKV+KI M+AA +DVNSDPSILGGRKL
Sbjct: 23  NPEVVNIGAIFTFSTINGKVAKIAMKAAEQDVNSDPSILGGRKL 66


>emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]
          Length = 959

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/44 (77%), Positives = 40/44 (90%)
 Frame = +1

Query: 184 SPDDVNIGAIFSFKTINGKVSKIGMEAAVEDVNSDPSILGGRKL 315
           +P+ VNIGAIF+F TINGKV+KI M+AA +DVNSDPSILGGRKL
Sbjct: 82  NPEVVNIGAIFTFSTINGKVAKIAMKAAEQDVNSDPSILGGRKL 125


>gb|ABO28526.1| glutamate receptor [Malus hupehensis]
          Length = 946

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/43 (72%), Positives = 38/43 (88%)
 Frame = +1

Query: 187 PDDVNIGAIFSFKTINGKVSKIGMEAAVEDVNSDPSILGGRKL 315
           PD VN+GAIFSF TI GKV+K+ +EAAV+DVNSDPS+LGG K+
Sbjct: 36  PDVVNLGAIFSFDTIIGKVAKVAIEAAVKDVNSDPSVLGGTKM 78


>ref|XP_002313575.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222849983|gb|EEE87530.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 900

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/40 (72%), Positives = 37/40 (92%)
 Frame = +1

Query: 196 VNIGAIFSFKTINGKVSKIGMEAAVEDVNSDPSILGGRKL 315
           VN+GAIF+F +ING+V+KI MEAA +D+NSDPS+LGGRKL
Sbjct: 28  VNVGAIFTFSSINGRVAKIAMEAAEDDINSDPSLLGGRKL 67


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