BLASTX nr result

ID: Scutellaria24_contig00026142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026142
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273712.2| PREDICTED: transcription initiation factor T...   146   2e-33
emb|CBI21835.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_002973945.1| hypothetical protein SELMODRAFT_414424 [Sela...   136   2e-30
ref|XP_002969118.1| hypothetical protein SELMODRAFT_409957 [Sela...   133   2e-29
ref|XP_001779301.1| transcription initiation factor TFIID, subun...   126   2e-27

>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Vitis vinifera]
          Length = 2068

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/89 (79%), Positives = 77/89 (86%)
 Frame = -2

Query: 268  LLVYMYREFRASEKRGLRPSIRADELFLQFPSLSEAFLRKRLKNCADLQRGPSGHFLWVM 89
            LLVYMYREFRA EKRG  P IRADEL  QFP++SE FLRKRLK+CADLQ+G +G   WVM
Sbjct: 1064 LLVYMYREFRAGEKRGSLPCIRADELSAQFPNISEPFLRKRLKHCADLQKGSNGLLFWVM 1123

Query: 88   KRNFRIPSEEELRRMVTPENVCAYESMQA 2
            +RNFRIP EEELRRMVTPENVCAYESMQA
Sbjct: 1124 RRNFRIPLEEELRRMVTPENVCAYESMQA 1152


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/89 (79%), Positives = 77/89 (86%)
 Frame = -2

Query: 268  LLVYMYREFRASEKRGLRPSIRADELFLQFPSLSEAFLRKRLKNCADLQRGPSGHFLWVM 89
            LLVYMYREFRA EKRG  P IRADEL  QFP++SE FLRKRLK+CADLQ+G +G   WVM
Sbjct: 794  LLVYMYREFRAGEKRGSLPCIRADELSAQFPNISEPFLRKRLKHCADLQKGSNGLLFWVM 853

Query: 88   KRNFRIPSEEELRRMVTPENVCAYESMQA 2
            +RNFRIP EEELRRMVTPENVCAYESMQA
Sbjct: 854  RRNFRIPLEEELRRMVTPENVCAYESMQA 882


>ref|XP_002973945.1| hypothetical protein SELMODRAFT_414424 [Selaginella moellendorffii]
            gi|300158277|gb|EFJ24900.1| hypothetical protein
            SELMODRAFT_414424 [Selaginella moellendorffii]
          Length = 1916

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/89 (70%), Positives = 75/89 (84%)
 Frame = -2

Query: 268  LLVYMYREFRASEKRGLRPSIRADELFLQFPSLSEAFLRKRLKNCADLQRGPSGHFLWVM 89
            LLV++YREFRA +K G+ P I ADEL   FPSL++ F+RKRLK+CADLQRGP G   WVM
Sbjct: 916  LLVHVYREFRAKDKPGMSPQIGADELMAHFPSLTDGFIRKRLKHCADLQRGPHGDMRWVM 975

Query: 88   KRNFRIPSEEELRRMVTPENVCAYESMQA 2
            ++ +RIPSEEELRRMVTPENVC+YESMQA
Sbjct: 976  RQGYRIPSEEELRRMVTPENVCSYESMQA 1004


>ref|XP_002969118.1| hypothetical protein SELMODRAFT_409957 [Selaginella moellendorffii]
            gi|300163623|gb|EFJ30234.1| hypothetical protein
            SELMODRAFT_409957 [Selaginella moellendorffii]
          Length = 1140

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/89 (69%), Positives = 74/89 (83%)
 Frame = -2

Query: 268  LLVYMYREFRASEKRGLRPSIRADELFLQFPSLSEAFLRKRLKNCADLQRGPSGHFLWVM 89
            LLV++YREFRA +K G+   I ADEL   FPSL++ F+RKRLK+CADLQRGP G   WVM
Sbjct: 915  LLVHVYREFRAKDKPGMSSQIGADELMAHFPSLTDGFIRKRLKHCADLQRGPHGDMRWVM 974

Query: 88   KRNFRIPSEEELRRMVTPENVCAYESMQA 2
            ++ +RIPSEEELRRMVTPENVC+YESMQA
Sbjct: 975  RQGYRIPSEEELRRMVTPENVCSYESMQA 1003


>ref|XP_001779301.1| transcription initiation factor TFIID, subunit TAF1 [Physcomitrella
            patens subsp. patens] gi|162669313|gb|EDQ55903.1|
            transcription initiation factor TFIID, subunit TAF1
            [Physcomitrella patens subsp. patens]
          Length = 2253

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/90 (67%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268  LLVYMYREFRASEKRG-LRPSIRADELFLQFPSLSEAFLRKRLKNCADLQRGPSGHFLWV 92
            LLVY+YREFR  EK G + P +RAD++  QFPSL+E F+RKRLK+CADLQ+   G   W+
Sbjct: 1143 LLVYLYREFREKEKPGVITPHVRADDVTSQFPSLTEGFIRKRLKHCADLQK-IGGEMCWI 1201

Query: 91   MKRNFRIPSEEELRRMVTPENVCAYESMQA 2
            M+RNFRIPSEEE+RR+VTPENVC YESMQA
Sbjct: 1202 MRRNFRIPSEEEMRRLVTPENVCTYESMQA 1231


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