BLASTX nr result

ID: Scutellaria24_contig00026118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026118
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320961.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-11
ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat...    63   4e-11
gb|ACU33853.1| PPR1 protein [Capsicum annuum]                          61   5e-11
ref|XP_002310676.1| predicted protein [Populus trichocarpa] gi|2...    63   1e-10
ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat...    60   1e-10

>ref|XP_002320961.1| predicted protein [Populus trichocarpa] gi|222861734|gb|EEE99276.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 62.0 bits (149), Expect(2) = 1e-11
 Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
 Frame = -2

Query: 401 KPDVISFSILIGALCKEGQTQEAEKLLMKMEKSGCS----TYNVFVQGLLDRNASHNVIS 234
           KP+V +++ L+GALCKEG   EA KL  KME+ GC+     YNV +QG L          
Sbjct: 374 KPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQ 433

Query: 233 IL*EMERRGFLLHATT 186
           ++ EM  RGF   A T
Sbjct: 434 LVEEMVNRGFSADAAT 449



 Score = 32.0 bits (71), Expect(2) = 1e-11
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -1

Query: 495 PNIVTYTILIARLCKEKRLDMAKSLFAEL 409
           PNI+TY +L+  LCK   L+ A +LF E+
Sbjct: 305 PNIMTYGVLLDGLCKHGNLEEAFALFQEM 333


>ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score = 63.2 bits (152), Expect(2) = 4e-11
 Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = -2

Query: 419 LPNFHPKPDVISFSILIGALCKEGQTQEAEKLLMKMEKSGC----STYNVFVQGLLDRNA 252
           LP+   K DV++++ +I  LCKEG   +AE LLMKME++GC     TYNVFV+GLL R  
Sbjct: 483 LPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYD 542

Query: 251 SHNVISIL*EMERRGFLLHATT 186
                  L  M+ +G    ATT
Sbjct: 543 ISRSTKYLLLMKGKGLSADATT 564



 Score = 29.3 bits (64), Expect(2) = 4e-11
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 492 NIVTYTILIARLCKEKRLDMAKSLFAELPSK 400
           N+V Y I++  +C   +L+ A+ LF+ LPSK
Sbjct: 456 NVVIYNIVLDGMCSFGKLNDAQELFSCLPSK 486


>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score = 61.2 bits (147), Expect(2) = 5e-11
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
 Frame = -2

Query: 419 LPNFHPKPDVISFSILIGALCKEGQTQEAEKLLMKMEKSGCS----TYNVFVQGLLDRNA 252
           LP+    PDV +++++I   C+EG   E + +L KME +GC     TYNV +QG    N 
Sbjct: 474 LPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNK 533

Query: 251 SHNVISIL*EMERRGFLLHATT 186
              ++S + EM  RGF   ATT
Sbjct: 534 ISEIVSFMKEMAGRGFSFDATT 555



 Score = 30.8 bits (68), Expect(2) = 5e-11
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -1

Query: 492 NIVTYTILIARLCKEKRLDMAKSLFAELPS 403
           NI  YT++I  LCK  R+  A ++F +LPS
Sbjct: 447 NISFYTVVINGLCKNDRVREAHAIFEKLPS 476


>ref|XP_002310676.1| predicted protein [Populus trichocarpa] gi|222853579|gb|EEE91126.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 62.8 bits (151), Expect(2) = 1e-10
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
 Frame = -2

Query: 401 KPDVISFSILIGALCKEGQTQEAEKLLMKMEKSGC----STYNVFVQGLLDRNASHNVIS 234
           KPDV +++ L+  LC+EG   EA +L  KME+ GC     +YNV +QG L  N +  V+ 
Sbjct: 317 KPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQ 376

Query: 233 IL*EMERRGFLLHATT 186
           ++ EM  RGF   A T
Sbjct: 377 LIHEMADRGFYADAVT 392



 Score = 28.1 bits (61), Expect(2) = 1e-10
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -1

Query: 495 PNIVTYTILIARLCKEKRLDMAKSLFAEL 409
           P++V YTI+I  +C+ +++  AK + + L
Sbjct: 283 PDLVVYTIIINGMCRSRKVKDAKEVLSRL 311


>ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score = 59.7 bits (143), Expect(2) = 1e-10
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
 Frame = -2

Query: 401 KPDVISFSILIGALCKEGQTQEAEKLLMKMEKSGCS----TYNVFVQGLLDRNASHNVIS 234
           +P+V +++I+I  LC+ G   EA KL M+M+ +GCS    TYN   QGLL    +   I 
Sbjct: 485 RPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQ 544

Query: 233 IL*EMERRGFLLHATT 186
           +L EM  RGF    +T
Sbjct: 545 LLQEMLARGFSADVST 560



 Score = 30.8 bits (68), Expect(2) = 1e-10
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 495 PNIVTYTILIARLCKEKRLDMAKSLFAELPSK 400
           P+I  YTI+I  +C+   L+ A+ +F+ L SK
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 482


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