BLASTX nr result

ID: Scutellaria24_contig00026096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026096
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   170   1e-40
emb|CBI26575.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus co...   169   3e-40
ref|XP_002319214.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea m...   142   3e-32

>ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 834

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/138 (60%), Positives = 102/138 (73%)
 Frame = -3

Query: 419 GLNQLKVDFVLGQPFKPLDQLMGVXXXXXXXXXXXLYRNLMTDPSSPILDFYPSEFELDL 240
           GL+QL + F LG+PFKP DQLMGV            YR LM D +SPILDFYP++FELD+
Sbjct: 554 GLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKLMMDETSPILDFYPADFELDM 613

Query: 239 NGKNKTWKAVCRLPFIDEDRLLTEIAKVEHTLTDAERQRNTLGLAKLFIDMSNPLSEKIF 60
           NGK   W+A+C+LPFI E RLL EIAKVE TLTD E+ RN LG+  LFI +S+PL+ KIF
Sbjct: 614 NGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDALFIHISDPLAVKIF 673

Query: 59  TFWERNKDNPKLLKAKVK 6
           +F++R KD+PKL  AKVK
Sbjct: 674 SFYKRKKDHPKLPMAKVK 691


>emb|CBI26575.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/138 (60%), Positives = 102/138 (73%)
 Frame = -3

Query: 419 GLNQLKVDFVLGQPFKPLDQLMGVXXXXXXXXXXXLYRNLMTDPSSPILDFYPSEFELDL 240
           GL+QL + F LG+PFKP DQLMGV            YR LM D +SPILDFYP++FELD+
Sbjct: 535 GLDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKLMMDETSPILDFYPADFELDM 594

Query: 239 NGKNKTWKAVCRLPFIDEDRLLTEIAKVEHTLTDAERQRNTLGLAKLFIDMSNPLSEKIF 60
           NGK   W+A+C+LPFI E RLL EIAKVE TLTD E+ RN LG+  LFI +S+PL+ KIF
Sbjct: 595 NGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDALFIHISDPLAVKIF 654

Query: 59  TFWERNKDNPKLLKAKVK 6
           +F++R KD+PKL  AKVK
Sbjct: 655 SFYKRKKDHPKLPMAKVK 672


>ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
           gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease,
           putative [Ricinus communis]
          Length = 1545

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/136 (60%), Positives = 103/136 (75%)
 Frame = -3

Query: 425 FNGLNQLKVDFVLGQPFKPLDQLMGVXXXXXXXXXXXLYRNLMTDPSSPILDFYPSEFEL 246
           F GL+ LK+ F LG PFKP+DQLMGV           LYR LMTD SSPILDFYPS+FEL
Sbjct: 533 FYGLDDLKIQFTLGVPFKPMDQLMGVLPAASAHALPMLYRKLMTDESSPILDFYPSDFEL 592

Query: 245 DLNGKNKTWKAVCRLPFIDEDRLLTEIAKVEHTLTDAERQRNTLGLAKLFIDMSNPLSEK 66
           D+NGK + W+A+C+LPFIDE RLL+EI KVEHTLTD ER+RN+LG   LF+ +S+PL++ 
Sbjct: 593 DMNGKRRKWQAICKLPFIDESRLLSEITKVEHTLTDDERRRNSLGSNFLFVHISHPLADM 652

Query: 65  IFTFWERNKDNPKLLK 18
           I  F+++N+D   LLK
Sbjct: 653 IIYFFKQNRDPNVLLK 668


>ref|XP_002319214.1| predicted protein [Populus trichocarpa] gi|222857590|gb|EEE95137.1|
           predicted protein [Populus trichocarpa]
          Length = 692

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/126 (54%), Positives = 90/126 (71%)
 Frame = -3

Query: 425 FNGLNQLKVDFVLGQPFKPLDQLMGVXXXXXXXXXXXLYRNLMTDPSSPILDFYPSEFEL 246
           F G +QL++ F LG+PFKP DQLM V            YR LM D SSPILDFYP++FEL
Sbjct: 485 FYGCDQLEIHFTLGEPFKPFDQLMAVLPAASAHALPLFYRKLMIDASSPILDFYPTDFEL 544

Query: 245 DLNGKNKTWKAVCRLPFIDEDRLLTEIAKVEHTLTDAERQRNTLGLAKLFIDMSNPLSEK 66
           D NGK  +W+A+C+LPFI+E RL++EI KVEHTLTD ER+RN LG   L + +S+PL+ K
Sbjct: 545 DNNGKRFSWQAICKLPFIEESRLVSEITKVEHTLTDEERRRNRLGYDVLCVHVSHPLAVK 604

Query: 65  IFTFWE 48
           + + +E
Sbjct: 605 VISLFE 610


>tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
          Length = 1066

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/122 (54%), Positives = 87/122 (71%)
 Frame = -3

Query: 422 NGLNQLKVDFVLGQPFKPLDQLMGVXXXXXXXXXXXLYRNLMTDPSSPILDFYPSEFELD 243
           +GL QL + F LG PFKP DQLMGV            YR LMTDP+SPI+DFYP++FE+D
Sbjct: 605 SGLGQLNIKFELGTPFKPFDQLMGVFPAASAHALPLQYRRLMTDPNSPIIDFYPTDFEVD 664

Query: 242 LNGKNKTWKAVCRLPFIDEDRLLTEIAKVEHTLTDAERQRNTLGLAKLFIDMSNPLSEKI 63
           +NGK  +W+ + +LPFIDEDRLL EI KVEHTLT  E +RN++    LF++ S+PLS  I
Sbjct: 665 MNGKRYSWQGIAKLPFIDEDRLLAEIKKVEHTLTPEEARRNSIMCDMLFVNGSHPLSPYI 724

Query: 62  FT 57
           ++
Sbjct: 725 YS 726


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