BLASTX nr result

ID: Scutellaria24_contig00026091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026091
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat...    80   2e-13
ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat...    70   2e-10
ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat...    70   2e-10
ref|NP_173127.4| pentatricopeptide repeat-containing protein [Ar...    69   3e-10
ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816...    66   3e-09

>ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830 [Vitis vinifera] gi|297735747|emb|CBI18434.3|
           unnamed protein product [Vitis vinifera]
          Length = 659

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/72 (51%), Positives = 52/72 (72%)
 Frame = +3

Query: 9   VDAHIHTIIMNGLIKSGSFQKAVRIFRKATANKFPLDSVSYHVVIDGLIRGGEMEEAYAM 188
           +DAHIHT+I+ GLIK+G F +AVR+F+KA   ++ LD+VSY V I GL++GG   EA  +
Sbjct: 467 LDAHIHTVIIGGLIKAGKFHRAVRLFKKAMVERYTLDAVSYTVAIYGLLKGGRTGEACIL 526

Query: 189 LSQMKEMDIPLN 224
            +QMKE  +  N
Sbjct: 527 YNQMKEAGLAPN 538


>ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 525

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/73 (50%), Positives = 47/73 (64%)
 Frame = +3

Query: 6   GVDAHIHTIIMNGLIKSGSFQKAVRIFRKATANKFPLDSVSYHVVIDGLIRGGEMEEAYA 185
           GVDAHIHT+I++GLIK+G F  A+RIFR+    +  LD VSY V I GL+  G   EA  
Sbjct: 379 GVDAHIHTVIIDGLIKAGKFHSAIRIFRRNLLEENSLDVVSYSVAIRGLLLVGRNTEASN 438

Query: 186 MLSQMKEMDIPLN 224
           + + MKE  I  N
Sbjct: 439 LYNYMKEAGINPN 451


>ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 665

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/73 (50%), Positives = 47/73 (64%)
 Frame = +3

Query: 6   GVDAHIHTIIMNGLIKSGSFQKAVRIFRKATANKFPLDSVSYHVVIDGLIRGGEMEEAYA 185
           GVDAHIHT+I++GLIK+G F  A+RIFR+    +  LD VSY V I GL+  G   EA  
Sbjct: 471 GVDAHIHTVIIDGLIKAGKFHSAIRIFRRNLLEENSLDVVSYSVAIRGLLLVGRNTEASN 530

Query: 186 MLSQMKEMDIPLN 224
           + + MKE  I  N
Sbjct: 531 LYNYMKEAGINPN 543


>ref|NP_173127.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806394|sp|Q3EDA9.2|PPR46_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g16830 gi|332191383|gb|AEE29504.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 608

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/74 (44%), Positives = 47/74 (63%)
 Frame = +3

Query: 9   VDAHIHTIIMNGLIKSGSFQKAVRIFRKATANKFPLDSVSYHVVIDGLIRGGEMEEAYAM 188
           +DAH H+ I++ LI+ G +  AV +F++    K+PLD VSY V I GL+R   +EEAY++
Sbjct: 452 LDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSL 511

Query: 189 LSQMKEMDIPLNHR 230
              MKE  I  N R
Sbjct: 512 CCDMKEGGIYPNRR 525


>ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816100 [Glycine max]
          Length = 1122

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/56 (55%), Positives = 41/56 (73%)
 Frame = +3

Query: 12  DAHIHTIIMNGLIKSGSFQKAVRIFRKATANKFPLDSVSYHVVIDGLIRGGEMEEA 179
           DAHIHT+I+ GL+K+G F KAV + R A  NK+PLD+V+Y V I  L+RG   +EA
Sbjct: 454 DAHIHTVIIVGLLKTGKFHKAVSVLRFAVMNKYPLDTVAYTVGICALLRGRRTQEA 509


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