BLASTX nr result

ID: Scutellaria24_contig00026082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00026082
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308266.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_004170730.1| PREDICTED: RING-H2 finger protein ATL1-like ...   151   8e-35
ref|XP_004144121.1| PREDICTED: RING-H2 finger protein ATL1-like ...   149   3e-34
ref|XP_002514067.1| monooxygenase, putative [Ricinus communis] g...   147   2e-33
gb|ADM35971.1| RING zinc finger protein [Amaranthus hypochondria...   112   6e-23

>ref|XP_002308266.1| predicted protein [Populus trichocarpa] gi|222854242|gb|EEE91789.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  166 bits (421), Expect = 2e-39
 Identities = 87/165 (52%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
 Frame = -2

Query: 569 PPSPPRSNMPMLYYGLVVIGTAAIVLVLYNLVVVKWCSDITQQPQXXXXXXXXXXXXXRA 390
           PP P +SN+PMLYYGLVV+GTAAIVL +YNL+++KWC+    +               ++
Sbjct: 19  PPPPHKSNLPMLYYGLVVVGTAAIVLAVYNLIIIKWCAQRGGR-SGQGPNVFTEVTASQS 77

Query: 389 LNFIGINFISSFKYER---DGDGDS----ECIVCLSVFEEGEEIRQLPKCKHYFHAPCID 231
                 N  SSFKY++   DGD D     EC VCLS FEEGEE+RQLP+CKH FHAPCID
Sbjct: 78  FEHSNSNLPSSFKYKKGKIDGDQDQGSGYECAVCLSAFEEGEEVRQLPRCKHSFHAPCID 137

Query: 230 MWLYSHMDCPICRSPVLHQHATTEQSEHSHEVAEQSEQSREGLLD 96
           MWLYSH DCP+CRS V    A   +   +   A+ SE SREGLLD
Sbjct: 138 MWLYSHSDCPLCRSSVDPPLAVCNR-RTAAAAADTSENSREGLLD 181


>ref|XP_004170730.1| PREDICTED: RING-H2 finger protein ATL1-like [Cucumis sativus]
          Length = 162

 Score =  151 bits (381), Expect = 8e-35
 Identities = 78/154 (50%), Positives = 103/154 (66%), Gaps = 10/154 (6%)
 Frame = -2

Query: 566 PSPPRSNMPMLYYGLVVIGTAAIVLVLYNLVVVKWCSDITQQPQXXXXXXXXXXXXXRAL 387
           P P +S++PMLYYGLVV+GTAAIVLVLYN +V+KWCSD   + +                
Sbjct: 11  PHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRRMAGSYEEMMNSSRSFQ 70

Query: 386 NFIGINFISSFKYER-------DGDGDSECIVCLSVFEEGEEIRQLPKCKHYFHAPCIDM 228
                + +SSFK+++       +G+G +EC VCLS FE+GEE+++LP+C H FHA CIDM
Sbjct: 71  -----SSLSSFKFKKVAGAGAEEGNG-NECAVCLSAFEDGEEVKKLPRCTHTFHASCIDM 124

Query: 227 WLYSHMDCPICRSPV--LHQH-ATTEQSEHSHEV 135
           WLYSH DCP+CR+PV  L +H AT EQ E+S  V
Sbjct: 125 WLYSHSDCPLCRAPVAGLSRHEATAEQEENSGHV 158


>ref|XP_004144121.1| PREDICTED: RING-H2 finger protein ATL1-like [Cucumis sativus]
          Length = 166

 Score =  149 bits (376), Expect = 3e-34
 Identities = 79/164 (48%), Positives = 104/164 (63%), Gaps = 7/164 (4%)
 Frame = -2

Query: 566 PSPPRSNMPMLYYGLVVIGTAAIVLVLYNLVVVKWCSDITQQPQXXXXXXXXXXXXXRAL 387
           P P +S++PMLYYGLVV+GTAAIVLVLYN +V+KWCSD   + +                
Sbjct: 11  PHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRRMAGSYEEMMNSSRSFQ 70

Query: 386 NFIGINFISSFKYER-------DGDGDSECIVCLSVFEEGEEIRQLPKCKHYFHAPCIDM 228
                + +SSFK+++       +G+G +EC VCLS FE+GEE+++LP+C H FHA CIDM
Sbjct: 71  -----SSLSSFKFKKVAGAGAEEGNG-NECAVCLSAFEDGEEVKKLPRCTHTFHASCIDM 124

Query: 227 WLYSHMDCPICRSPVLHQHATTEQSEHSHEVAEQSEQSREGLLD 96
           WLYSH DCP+CR+PV    A   +S H    AEQ E S   LL+
Sbjct: 125 WLYSHSDCPLCRAPV--AVAVAGRSRH-EATAEQEENSGHVLLE 165


>ref|XP_002514067.1| monooxygenase, putative [Ricinus communis]
           gi|223546523|gb|EEF48021.1| monooxygenase, putative
           [Ricinus communis]
          Length = 468

 Score =  147 bits (370), Expect = 2e-33
 Identities = 76/165 (46%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
 Frame = -2

Query: 569 PPSPP-RSNMPMLYYGLVVIGTAAIVLVLYNLVVVKWCSDITQQPQXXXXXXXXXXXXXR 393
           PP P  R+NMPM+YYGLV+IGTAAIVL +YNL++++WC+   +Q                
Sbjct: 298 PPLPAQRNNMPMVYYGLVIIGTAAIVLAIYNLIIIRWCTHQHRQDHSSGQGPNRFVEVTT 357

Query: 392 ALNFIGINFISSFKYERD-------GDGDSECIVCLSVFEEGEEIRQLPKCKHYFHAPCI 234
           A      N ++SFKY++D       G    EC VCLSVFE+GEE+++LP C H FHA CI
Sbjct: 358 ASQSSS-NLLTSFKYKKDNLIAKDHGSSHYECAVCLSVFEDGEEVKKLPGCNHSFHASCI 416

Query: 233 DMWLYSHMDCPICRSPVLHQHATTEQSEHSHEVAEQSEQSREGLL 99
           DMWLYSH DCP+CR+ V             H V   S+ S+E LL
Sbjct: 417 DMWLYSHYDCPLCRARV---DPLPPSFYRRHSVPTASDNSQENLL 458


>gb|ADM35971.1| RING zinc finger protein [Amaranthus hypochondriacus]
          Length = 173

 Score =  112 bits (279), Expect = 6e-23
 Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
 Frame = -2

Query: 548 NMPMLYYGLVVIGTAAIVLVLYNLVVVKWCSDITQQPQXXXXXXXXXXXXXRALNFIGIN 369
           N+ MLY G  V+ TA +VL +Y+ + + WCSD                   +A   I  N
Sbjct: 26  NISMLYCGFFVVATAGLVLAIYHCLALNWCSDYPPV-WLRTAQTGPTEQQCQARKVIEFN 84

Query: 368 FISSFKYERD--GDGDSECIVCLSVFEEGEEIRQLPKCKHYFHAPCIDMWLYSHMDCPIC 195
            I  +KY++   G  + EC+VCLS FEE E+IR+L KCKH FHA CIDMWL+SH DCP+C
Sbjct: 85  SIR-YKYKKGEMGTNNEECVVCLSGFEEEEDIRKLVKCKHSFHALCIDMWLFSHFDCPLC 143

Query: 194 RSPV 183
           R+PV
Sbjct: 144 RAPV 147


Top