BLASTX nr result
ID: Scutellaria24_contig00025925
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00025925
(575 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containi... 139 5e-40
emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera] 139 6e-40
ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|2... 127 2e-35
ref|XP_003545589.1| PREDICTED: pentatricopeptide repeat-containi... 129 2e-34
ref|XP_003588542.1| Pentatricopeptide repeat-containing protein ... 130 2e-28
>ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Vitis vinifera]
gi|296081891|emb|CBI20896.3| unnamed protein product
[Vitis vinifera]
Length = 420
Score = 139 bits (350), Expect(2) = 5e-40
Identities = 66/130 (50%), Positives = 92/130 (70%)
Frame = -2
Query: 397 IMEWKLEKLTAQDRKSHDCYARLISLCENIRNLPTALLIFSSMEAHGVGANSLVFNALIS 218
++EW+LEK+ + + Y LI LC ++N+P A+ +F+SMEAHG+ S VFNALI
Sbjct: 89 VLEWRLEKMVRDNERDLVPYLELIFLCSKVQNVPFAMRVFNSMEAHGIKLTSSVFNALIY 148
Query: 217 TSLSLGNFITALSLFEIMEGSESYRPDSDTYDAFISAYSNSGNKNATESWLTAKRASGFS 38
T LS GN +TALSLFEIM+ SE+ +P+S+TY+ FIS YSN GN A ++W A++ +GFS
Sbjct: 149 TCLSSGNVMTALSLFEIMQSSENCKPNSETYNTFISVYSNLGNDKAMQAWYLAQKGAGFS 208
Query: 37 VDAQTYGFLI 8
D +TY LI
Sbjct: 209 ADLRTYESLI 218
Score = 50.8 bits (120), Expect(2) = 5e-40
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Frame = -1
Query: 545 PLLQKLLKAPVSRIKSILDSE--FTSDSTHFPWPALLSSLNNSAPHKANL 402
PLL KLL+ +SRIK++LDSE FT S+ F W LL++L +S+P KA+L
Sbjct: 39 PLLIKLLQESISRIKTVLDSEDNFTFKSSDFSWDILLTTLKSSSPAKAHL 88
>emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera]
Length = 1331
Score = 139 bits (349), Expect(2) = 6e-40
Identities = 66/130 (50%), Positives = 91/130 (70%)
Frame = -2
Query: 397 IMEWKLEKLTAQDRKSHDCYARLISLCENIRNLPTALLIFSSMEAHGVGANSLVFNALIS 218
++EW+LEK+ + + Y LI LC ++N+P A+ +F+SMEAHG+ S VFNALI
Sbjct: 1000 VLEWRLEKMVRDNERDLVPYLELIFLCSKVQNVPFAMRVFNSMEAHGIKLTSSVFNALIC 1059
Query: 217 TSLSLGNFITALSLFEIMEGSESYRPDSDTYDAFISAYSNSGNKNATESWLTAKRASGFS 38
T LS GN +TALSLFEIM+ SE+ +P+S+TY+ FIS YSN GN A ++W A + +GFS
Sbjct: 1060 TCLSSGNVMTALSLFEIMQSSENCKPNSETYNTFISVYSNLGNDKAMQAWYLAXKGAGFS 1119
Query: 37 VDAQTYGFLI 8
D +TY LI
Sbjct: 1120 ADLRTYESLI 1129
Score = 50.8 bits (120), Expect(2) = 6e-40
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Frame = -1
Query: 545 PLLQKLLKAPVSRIKSILDSE--FTSDSTHFPWPALLSSLNNSAPHKANL 402
PLL KLL+ +SRIK++LDSE FT S+ F W LL++L +S+P KA+L
Sbjct: 950 PLLIKLLQESISRIKTVLDSEDNFTFKSSDFSWDILLTTLKSSSPAKAHL 999
>ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|222855543|gb|EEE93090.1|
predicted protein [Populus trichocarpa]
Length = 424
Score = 127 bits (320), Expect(2) = 2e-35
Identities = 61/130 (46%), Positives = 87/130 (66%)
Frame = -2
Query: 397 IMEWKLEKLTAQDRKSHDCYARLISLCENIRNLPTALLIFSSMEAHGVGANSLVFNALIS 218
++EW+L ++ + HD Y+ LISLC I+N+ A+ +F+SMEA G+ + VFN+L+
Sbjct: 94 VLEWRLGRMLDDNEIDHDEYSSLISLCGKIQNVSLAMHVFASMEARGIKPTTSVFNSLLY 153
Query: 217 TSLSLGNFITALSLFEIMEGSESYRPDSDTYDAFISAYSNSGNKNATESWLTAKRASGFS 38
L N ITALSLFEIME SESY+P+S+TYD F++ +SN + N ++W KRA+GFS
Sbjct: 154 ACLLSSNVITALSLFEIMENSESYKPNSETYDKFVAGFSNLRDVNKMQAWFVGKRAAGFS 213
Query: 37 VDAQTYGFLI 8
Q Y LI
Sbjct: 214 ASLQNYECLI 223
Score = 46.6 bits (109), Expect(2) = 2e-35
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Frame = -1
Query: 575 RHS-SSASTHIPLLQKLLKAPVSRIKSILDSE--FTSDSTHFPWPALLSSLNNSAPHKAN 405
+HS S+AS+ PLL KLL+ P S+I LDS+ F S+ W L+++L +S+P KA+
Sbjct: 33 QHSFSTASSSDPLLSKLLQTPTSKIIITLDSDHSFNLKSSQLSWDPLITNLRSSSPEKAH 92
Query: 404 L 402
L
Sbjct: 93 L 93
>ref|XP_003545589.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 421
Score = 129 bits (324), Expect(2) = 2e-34
Identities = 65/130 (50%), Positives = 90/130 (69%)
Frame = -2
Query: 397 IMEWKLEKLTAQDRKSHDCYARLISLCENIRNLPTALLIFSSMEAHGVGANSLVFNALIS 218
I+EW LEK+ ++ K D ++ LI LC ++++ + +FSSMEA GV NSLVFN+LIS
Sbjct: 89 ILEWILEKMLKENEKDRDLFSELIFLCGKVKDVMLGMRVFSSMEATGVKPNSLVFNSLIS 148
Query: 217 TSLSLGNFITALSLFEIMEGSESYRPDSDTYDAFISAYSNSGNKNATESWLTAKRASGFS 38
LS + +TA+SLFEIME SESY+PD TY+ FISA+S SGN +A +W +AK+A+
Sbjct: 149 VCLSSHDIVTAVSLFEIMESSESYKPDFHTYNIFISAFSKSGNVDAMLAWYSAKKAARLG 208
Query: 37 VDAQTYGFLI 8
D Q + LI
Sbjct: 209 PDLQMFESLI 218
Score = 42.4 bits (98), Expect(2) = 2e-34
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = -1
Query: 572 HSSSASTHIPLLQKLLKAPVSRIKSILDSEFTS-DSTHFPWPALLSSLNNSAPHKANL 402
+S+S S PLL KLL+ P S IK+ LD E S S+ W L++SL+ S+ KA L
Sbjct: 31 NSNSHSNSNPLLLKLLQVPNSHIKTTLDQEMASLQSSQRSWDFLITSLSPSSSDKARL 88
>ref|XP_003588542.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477590|gb|AES58793.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 428
Score = 130 bits (327), Expect = 2e-28
Identities = 72/157 (45%), Positives = 98/157 (62%), Gaps = 6/157 (3%)
Frame = -2
Query: 460 FPGPPFSPLSITLLPTKLICQ------IMEWKLEKLTAQDRKSHDCYARLISLCENIRNL 299
FP P S LS L T L ++EW LEKL ++ K H ++ LI LC ++N+
Sbjct: 59 FPSLPTSLLSFDFLITSLSPSSQKPNLVLEWILEKLLKENVKDHGRFSELIFLCGKLKNV 118
Query: 298 PTALLIFSSMEAHGVGANSLVFNALISTSLSLGNFITALSLFEIMEGSESYRPDSDTYDA 119
+ +F+SME GV SLVFN+LIS LS + +TA SLFEIME SE+Y+PD TY+
Sbjct: 119 QLGINVFTSMEGVGVKPTSLVFNSLISACLSSHDIVTAYSLFEIMESSENYKPDFHTYNN 178
Query: 118 FISAYSNSGNKNATESWLTAKRASGFSVDAQTYGFLI 8
FISA+S SGN +A +W +AK+A+G D QT+ +I
Sbjct: 179 FISAFSKSGNVDAMLAWYSAKKATGLGPDLQTFESVI 215