BLASTX nr result

ID: Scutellaria24_contig00025910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025910
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...   236   1e-60
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   235   2e-60
ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containi...   234   4e-60
ref|XP_003590744.1| Pentatricopeptide repeat-containing protein ...   233   2e-59
ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|2...   230   1e-58

>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Cucumis sativus] gi|449504088|ref|XP_004162249.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  236 bits (602), Expect = 1e-60
 Identities = 105/141 (74%), Positives = 119/141 (84%)
 Frame = -1

Query: 434  RGVKKEPGCSWLEVENKVHVFLVDDAVHPEIHEVYNYXXXXXXXXXXLGYVPDTKYALHD 255
            RGVKKEP CSW EVENKVHVFLVDD VHPE+  +YNY          +GY+PDTKY LHD
Sbjct: 657  RGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHD 716

Query: 254  MESEQKEHSLSTHSEKLAVVYGILKLPRRATIRIFKNLRICGDCHNAIKFMSKAEGREII 75
            MESE KE++LSTHSEKLAV +G++KLP+ AT+R+FKNLRICGDCHNAIKFMSK  GREI+
Sbjct: 717  MESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIV 776

Query: 74   VRDGKRFHHFKDGECSCGNYW 12
            VRDGKRFHHFK+GECSC NYW
Sbjct: 777  VRDGKRFHHFKNGECSCRNYW 797


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
            [Vitis vinifera]
          Length = 799

 Score =  235 bits (600), Expect = 2e-60
 Identities = 107/141 (75%), Positives = 119/141 (84%)
 Frame = -1

Query: 434  RGVKKEPGCSWLEVENKVHVFLVDDAVHPEIHEVYNYXXXXXXXXXXLGYVPDTKYALHD 255
            +GVKKEPGCSW+EVENKVHVFLVDD VHPE+  VYNY          LGY+PDTK+ LHD
Sbjct: 659  KGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHD 718

Query: 254  MESEQKEHSLSTHSEKLAVVYGILKLPRRATIRIFKNLRICGDCHNAIKFMSKAEGREII 75
            MESEQKE+ LSTHSEKLAV +G+LKLP  AT+R+FKNLRICGDCHNA KFMSK   REI+
Sbjct: 719  MESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIV 778

Query: 74   VRDGKRFHHFKDGECSCGNYW 12
            VRDGKRFHHFK+GECSCGNYW
Sbjct: 779  VRDGKRFHHFKNGECSCGNYW 799


>ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Glycine max]
          Length = 782

 Score =  234 bits (598), Expect = 4e-60
 Identities = 108/141 (76%), Positives = 119/141 (84%)
 Frame = -1

Query: 434  RGVKKEPGCSWLEVENKVHVFLVDDAVHPEIHEVYNYXXXXXXXXXXLGYVPDTKYALHD 255
            RGVKKEPGCSW+EVEN VHVFLVDDAVHPE+H VY Y          LGYVPDTK+ LHD
Sbjct: 642  RGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHD 701

Query: 254  MESEQKEHSLSTHSEKLAVVYGILKLPRRATIRIFKNLRICGDCHNAIKFMSKAEGREII 75
            MESEQKE++LSTHSEKLAVVYGI+KLP  ATIR+FKNLRICGDCHNA K++SK   REII
Sbjct: 702  MESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVDREII 761

Query: 74   VRDGKRFHHFKDGECSCGNYW 12
            VRD KRFHHF++GECSC NYW
Sbjct: 762  VRDRKRFHHFRNGECSCSNYW 782


>ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355479792|gb|AES60995.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  233 bits (593), Expect = 2e-59
 Identities = 108/141 (76%), Positives = 117/141 (82%)
 Frame = -1

Query: 434  RGVKKEPGCSWLEVENKVHVFLVDDAVHPEIHEVYNYXXXXXXXXXXLGYVPDTKYALHD 255
            RGVKKEPGCSW+EVEN VHVFLVDDA HPE+  VY Y          LGYVPDTK+ LHD
Sbjct: 655  RGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHD 714

Query: 254  MESEQKEHSLSTHSEKLAVVYGILKLPRRATIRIFKNLRICGDCHNAIKFMSKAEGREII 75
            MESE KEHSLSTHSEKLAVVYGI+KLP  ATIR+FKNLRICGDCHNA K++SK   REI+
Sbjct: 715  MESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIV 774

Query: 74   VRDGKRFHHFKDGECSCGNYW 12
            VRD KRFHHFK+GECSCGNYW
Sbjct: 775  VRDRKRFHHFKNGECSCGNYW 795


>ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|222843726|gb|EEE81273.1|
            predicted protein [Populus trichocarpa]
          Length = 797

 Score =  230 bits (586), Expect = 1e-58
 Identities = 102/141 (72%), Positives = 116/141 (82%)
 Frame = -1

Query: 434  RGVKKEPGCSWLEVENKVHVFLVDDAVHPEIHEVYNYXXXXXXXXXXLGYVPDTKYALHD 255
            RGVKKEPGCSW+EVENKVH FLV DA HPE+ ++YNY          +GYVPDTK  LHD
Sbjct: 657  RGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHD 716

Query: 254  MESEQKEHSLSTHSEKLAVVYGILKLPRRATIRIFKNLRICGDCHNAIKFMSKAEGREII 75
            +ES+ KEH LSTHSEKLAV YG +KLP  AT+R+FKNLRICGDCHNA KFMSK  GREI+
Sbjct: 717  VESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIV 776

Query: 74   VRDGKRFHHFKDGECSCGNYW 12
            VRDGKRFHHF+DG+CSCG+YW
Sbjct: 777  VRDGKRFHHFRDGKCSCGDYW 797


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