BLASTX nr result

ID: Scutellaria24_contig00025862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025862
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis th...    97   3e-22
ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-21
emb|CBI26175.3| unnamed protein product [Vitis vinifera]               98   1e-21
ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-21
ref|XP_002516788.1| pentatricopeptide repeat-containing protein,...    94   2e-21

>ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis thaliana]
           gi|223635651|sp|P0C8Q8.1|PP394_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g19020, mitochondrial; Flags: Precursor
           gi|332005257|gb|AED92640.1| mitochondrial editing factor
           18 [Arabidopsis thaliana]
          Length = 685

 Score = 97.4 bits (241), Expect(2) = 3e-22
 Identities = 45/72 (62%), Positives = 57/72 (79%)
 Frame = +3

Query: 9   HAEVSLRIFTDLQSRAINPNSITFTGVLSVCSHAG*VEAGERHFKSMKIIYGLEPDIHHY 188
           HA+++L +++DLQS  I PNSITF GVLS C HAG VE G+ +F+SMK  +G+EPDI HY
Sbjct: 522 HAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHY 581

Query: 189 NCMVDMLGWAGR 224
            CMVD+LG AGR
Sbjct: 582 GCMVDLLGKAGR 593



 Score = 32.3 bits (72), Expect(2) = 3e-22
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +1

Query: 211 GGLEEAEELVKRMPMKADV 267
           G LEEA+E++K+MP+KADV
Sbjct: 592 GRLEEAKEMIKKMPVKADV 610


>ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial [Vitis vinifera]
          Length = 694

 Score = 97.8 bits (242), Expect(2) = 1e-21
 Identities = 44/72 (61%), Positives = 55/72 (76%)
 Frame = +3

Query: 9   HAEVSLRIFTDLQSRAINPNSITFTGVLSVCSHAG*VEAGERHFKSMKIIYGLEPDIHHY 188
           HA VSL++F+ LQ   I PNSITF GVLS C HAG V+ GE++FK MK +Y +EP+I HY
Sbjct: 531 HANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHY 590

Query: 189 NCMVDMLGWAGR 224
            CM+D+LG AGR
Sbjct: 591 GCMIDLLGRAGR 602



 Score = 30.4 bits (67), Expect(2) = 1e-21
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = +1

Query: 211 GGLEEAEELVKRMPMKADV 267
           G L+EA E++++MPMKADV
Sbjct: 601 GRLKEAAEMIRKMPMKADV 619


>emb|CBI26175.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score = 97.8 bits (242), Expect(2) = 1e-21
 Identities = 44/72 (61%), Positives = 55/72 (76%)
 Frame = +3

Query: 9   HAEVSLRIFTDLQSRAINPNSITFTGVLSVCSHAG*VEAGERHFKSMKIIYGLEPDIHHY 188
           HA VSL++F+ LQ   I PNSITF GVLS C HAG V+ GE++FK MK +Y +EP+I HY
Sbjct: 456 HANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHY 515

Query: 189 NCMVDMLGWAGR 224
            CM+D+LG AGR
Sbjct: 516 GCMIDLLGRAGR 527



 Score = 30.4 bits (67), Expect(2) = 1e-21
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = +1

Query: 211 GGLEEAEELVKRMPMKADV 267
           G L+EA E++++MPMKADV
Sbjct: 526 GRLKEAAEMIRKMPMKADV 544


>ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Cucumis sativus]
          Length = 874

 Score = 95.5 bits (236), Expect(2) = 2e-21
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = +3

Query: 9   HAEVSLRIFTDLQSRAINPNSITFTGVLSVCSHAG*VEAGERHFKSMKIIYGLEPDIHHY 188
           HA +SL IF++LQ R+I  NSITF GVLS C HAG VE GER+F SMK  +G+EP+I HY
Sbjct: 711 HANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHY 770

Query: 189 NCMVDMLGWAGRSR 230
            C+VD+LG  GR R
Sbjct: 771 GCLVDLLGRVGRLR 784



 Score = 31.6 bits (70), Expect(2) = 2e-21
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +1

Query: 211 GGLEEAEELVKRMPMKADV 267
           G L EAEE+V+ MPMKADV
Sbjct: 781 GRLREAEEIVRTMPMKADV 799


>ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543876|gb|EEF45402.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 710

 Score = 94.0 bits (232), Expect(2) = 2e-21
 Identities = 43/72 (59%), Positives = 55/72 (76%)
 Frame = +3

Query: 9   HAEVSLRIFTDLQSRAINPNSITFTGVLSVCSHAG*VEAGERHFKSMKIIYGLEPDIHHY 188
           HA +SL+IF+DL+ R I  N+ITF GVL+ C H G VE+G+RHF SMK  + ++PDI HY
Sbjct: 545 HANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHY 604

Query: 189 NCMVDMLGWAGR 224
            CMVD+LG AGR
Sbjct: 605 GCMVDLLGRAGR 616



 Score = 33.1 bits (74), Expect(2) = 2e-21
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +1

Query: 211 GGLEEAEELVKRMPMKADV 267
           G LEEAEE+++ MPMKADV
Sbjct: 615 GRLEEAEEMIRSMPMKADV 633


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