BLASTX nr result

ID: Scutellaria24_contig00025748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025748
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF03493.1| Ku70 homolog [Populus nigra]                          212   4e-53
ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   211   6e-53
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...   211   6e-53
ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|2...   211   6e-53
ref|XP_004161593.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   210   1e-52

>dbj|BAF03493.1| Ku70 homolog [Populus nigra]
          Length = 627

 Score =  212 bits (539), Expect = 4e-53
 Identities = 100/143 (69%), Positives = 126/143 (88%), Gaps = 1/143 (0%)
 Frame = -2

Query: 426 MDIDPDDVFRD-EDDNENEIYQERDATKEMLVYLVDASPNMFSTTCASDDEVDVSHFEVA 250
           M++DPDD+F+D EDD ++E YQ+R+++KE +VYLVDASP MFS+TC S+D  + +HF++A
Sbjct: 1   MELDPDDIFKDDEDDPDSEFYQQRESSKEFVVYLVDASPKMFSSTCPSEDGKEETHFQIA 60

Query: 249 VRSISLSLKTQIINRSYDEVAICFFNTREKKNLQDLNGVYVFCVPEREDLDRPTARLIKE 70
           +  I+ SLKTQIINRSYDEVAICFFNTREKKNLQDLNG +VF V ERE LDRPTARLIK+
Sbjct: 61  ISCIAQSLKTQIINRSYDEVAICFFNTREKKNLQDLNGAFVFNVAEREYLDRPTARLIKD 120

Query: 69  FDCIQESFSKQIGSKYGILSGTR 1
           FDCI+ESF+K IGS+YGI+SG+R
Sbjct: 121 FDCIEESFTKDIGSQYGIVSGSR 143


>ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Cucumis
           sativus]
          Length = 625

 Score =  211 bits (537), Expect = 6e-53
 Identities = 102/143 (71%), Positives = 125/143 (87%), Gaps = 1/143 (0%)
 Frame = -2

Query: 426 MDIDPDDVFRDEDDN-ENEIYQERDATKEMLVYLVDASPNMFSTTCASDDEVDVSHFEVA 250
           MD+DPD+VFRD+DD+ +N  +QER++TKE+ VYLVDASP MF+TTC S+D+ + +HF+VA
Sbjct: 1   MDLDPDEVFRDDDDDPDNPFFQERESTKELAVYLVDASPKMFTTTCLSEDKKEETHFQVA 60

Query: 249 VRSISLSLKTQIINRSYDEVAICFFNTREKKNLQDLNGVYVFCVPEREDLDRPTARLIKE 70
           +  IS SLKTQIINRSYDEVAICFFNTREKKNLQDLNGV+V  VPEREDLDRPTARL+K 
Sbjct: 61  LSCISQSLKTQIINRSYDEVAICFFNTREKKNLQDLNGVFVLNVPEREDLDRPTARLLKT 120

Query: 69  FDCIQESFSKQIGSKYGILSGTR 1
            D I+E F K+IGS+YGI+SG+R
Sbjct: 121 IDGIEEVFMKEIGSQYGIVSGSR 143


>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
           gi|223539210|gb|EEF40803.1| ku P70 DNA helicase,
           putative [Ricinus communis]
          Length = 626

 Score =  211 bits (537), Expect = 6e-53
 Identities = 101/143 (70%), Positives = 127/143 (88%), Gaps = 1/143 (0%)
 Frame = -2

Query: 426 MDIDPDDVFRD-EDDNENEIYQERDATKEMLVYLVDASPNMFSTTCASDDEVDVSHFEVA 250
           M++DPDDVFRD EDD +++ YQ+R+++KE +VYLVDASP MF+TT  ++D+ D +HF +A
Sbjct: 1   MELDPDDVFRDDEDDPDSDFYQQRESSKEFVVYLVDASPKMFTTTFPAEDQKDETHFHIA 60

Query: 249 VRSISLSLKTQIINRSYDEVAICFFNTREKKNLQDLNGVYVFCVPEREDLDRPTARLIKE 70
           V SI+ SLKTQIINRSYDEVAICFFNTREK+NLQDLNGV+V+ V ERE LDRPTARLIK+
Sbjct: 61  VSSIAQSLKTQIINRSYDEVAICFFNTREKRNLQDLNGVFVYNVAEREYLDRPTARLIKD 120

Query: 69  FDCIQESFSKQIGSKYGILSGTR 1
           FDCI+ESF K+IGS+YGI+SG+R
Sbjct: 121 FDCIEESFMKEIGSQYGIVSGSR 143


>ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|222860512|gb|EEE98059.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  211 bits (537), Expect = 6e-53
 Identities = 100/143 (69%), Positives = 125/143 (87%), Gaps = 1/143 (0%)
 Frame = -2

Query: 426 MDIDPDDVFRD-EDDNENEIYQERDATKEMLVYLVDASPNMFSTTCASDDEVDVSHFEVA 250
           M++DPDD+F+D EDD ++E YQ+R+++KE +VYLVDASP MFS+TC S+D  + +HF +A
Sbjct: 1   MELDPDDIFKDDEDDPDSEFYQQRESSKEFVVYLVDASPKMFSSTCPSEDGKEETHFHIA 60

Query: 249 VRSISLSLKTQIINRSYDEVAICFFNTREKKNLQDLNGVYVFCVPEREDLDRPTARLIKE 70
           +  I+ SLKTQIINRSYDEVAICFFNTREKKNLQDLNG +VF V ERE LDRPTARLIK+
Sbjct: 61  ISCIAQSLKTQIINRSYDEVAICFFNTREKKNLQDLNGAFVFNVAEREYLDRPTARLIKD 120

Query: 69  FDCIQESFSKQIGSKYGILSGTR 1
           FDCI+ESF+K IGS+YGI+SG+R
Sbjct: 121 FDCIEESFTKDIGSQYGIVSGSR 143


>ref|XP_004161593.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2
           subunit KU70-like [Cucumis sativus]
          Length = 625

 Score =  210 bits (535), Expect = 1e-52
 Identities = 102/143 (71%), Positives = 124/143 (86%), Gaps = 1/143 (0%)
 Frame = -2

Query: 426 MDIDPDDVFRDEDDN-ENEIYQERDATKEMLVYLVDASPNMFSTTCASDDEVDVSHFEVA 250
           MD+DPD+VFRD+DD+ +N  +QER++TKE+ VYLVDASP MF+TTC S+D  + +HF+VA
Sbjct: 1   MDLDPDEVFRDDDDDPDNPFFQERESTKELAVYLVDASPKMFTTTCLSEDXKEETHFQVA 60

Query: 249 VRSISLSLKTQIINRSYDEVAICFFNTREKKNLQDLNGVYVFCVPEREDLDRPTARLIKE 70
           +  IS SLKTQIINRSYDEVAICFFNTREKKNLQDLNGV+V  VPEREDLDRPTARL+K 
Sbjct: 61  LSCISQSLKTQIINRSYDEVAICFFNTREKKNLQDLNGVFVLNVPEREDLDRPTARLLKT 120

Query: 69  FDCIQESFSKQIGSKYGILSGTR 1
            D I+E F K+IGS+YGI+SG+R
Sbjct: 121 IDGIEEVFMKEIGSQYGIVSGSR 143


Top