BLASTX nr result

ID: Scutellaria24_contig00025695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025695
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g...   111   6e-23
emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]   111   6e-23
ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [M...   107   8e-22
gb|ABN05855.1| KH, type 1 [Medicago truncatula]                       107   8e-22
ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g...   105   4e-21

>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 648

 Score =  111 bits (278), Expect = 6e-23
 Identities = 66/138 (47%), Positives = 87/138 (63%), Gaps = 6/138 (4%)
 Frame = -2

Query: 471 MTSPFLLPQPSESP-SCTSMPEP-----STNNTFKRYNKPPQPPLFIPPGHVAFRLLCHA 310
           M + FL P    S  + T MP+P     + N + KR +KPP PP+ +P GHVAFRLLCHA
Sbjct: 1   MEASFLSPPAKRSIYTATGMPDPIPMAYAPNGSSKR-SKPPPPPIPVPAGHVAFRLLCHA 59

Query: 309 SRVGGLIGKSGSIIRQLQLLTNSKIRVEDPADSSDNRVISVVASPLVTKQIKLSPETSVI 130
           SR+GG+IGKSG I++QLQ  T ++IRVED   +SD+RVI V+A   V ++I L       
Sbjct: 60  SRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRIAL------- 112

Query: 129 GDDGDVELVDVSAAQEGI 76
              G  E V+ SAAQE +
Sbjct: 113 --QGSSEEVEASAAQEAV 128


>emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
          Length = 587

 Score =  111 bits (278), Expect = 6e-23
 Identities = 66/138 (47%), Positives = 87/138 (63%), Gaps = 6/138 (4%)
 Frame = -2

Query: 471 MTSPFLLPQPSESP-SCTSMPEP-----STNNTFKRYNKPPQPPLFIPPGHVAFRLLCHA 310
           M + FL P    S  + T MP+P     + N + KR +KPP PP+ +P GHVAFRLLCHA
Sbjct: 1   MEASFLSPPAKRSIYTATGMPDPIPMAYAPNGSSKR-SKPPPPPIPVPAGHVAFRLLCHA 59

Query: 309 SRVGGLIGKSGSIIRQLQLLTNSKIRVEDPADSSDNRVISVVASPLVTKQIKLSPETSVI 130
           SR+GG+IGKSG I++QLQ  T ++IRVED   +SD+RVI V+A   V ++I L       
Sbjct: 60  SRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRIAL------- 112

Query: 129 GDDGDVELVDVSAAQEGI 76
              G  E V+ SAAQE +
Sbjct: 113 --QGSSEEVEASAAQEAV 128


>ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
           gi|355482320|gb|AES63523.1| Heterogeneous nuclear
           ribonucleoprotein K [Medicago truncatula]
          Length = 766

 Score =  107 bits (268), Expect = 8e-22
 Identities = 61/134 (45%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
 Frame = -2

Query: 471 MTSPFLLPQPSESPSCTSMPEPSTNNTFKRY--NKPPQPPLFIPPGHVAFRLLCHASRVG 298
           M S FL P    S +    P P  N + KR   +KPPQ PL IP GHVAFRLLC++SR+G
Sbjct: 1   MGSNFLSPPAKRSITGLPDPNPFPNGSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIG 60

Query: 297 GLIGKSGSIIRQLQLLTNSKIRVEDPADSSDNRVISVVASPLVTKQIKLSPETSVIGDDG 118
           G+IGKSG++I+ LQL T +KIR+ED  + S +RVI V+ +        +  +  V    G
Sbjct: 61  GVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGAS------NIDGKVMVRSHSG 114

Query: 117 DVELVDVSAAQEGI 76
           D E ++VS AQE +
Sbjct: 115 DGEAIEVSKAQEAL 128


>gb|ABN05855.1| KH, type 1 [Medicago truncatula]
          Length = 222

 Score =  107 bits (268), Expect = 8e-22
 Identities = 61/134 (45%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
 Frame = -2

Query: 471 MTSPFLLPQPSESPSCTSMPEPSTNNTFKRY--NKPPQPPLFIPPGHVAFRLLCHASRVG 298
           M S FL P    S +    P P  N + KR   +KPPQ PL IP GHVAFRLLC++SR+G
Sbjct: 1   MGSNFLSPPAKRSITGLPDPNPFPNGSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIG 60

Query: 297 GLIGKSGSIIRQLQLLTNSKIRVEDPADSSDNRVISVVASPLVTKQIKLSPETSVIGDDG 118
           G+IGKSG++I+ LQL T +KIR+ED  + S +RVI V+ +        +  +  V    G
Sbjct: 61  GVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGAS------NIDGKVMVRSHSG 114

Query: 117 DVELVDVSAAQEGI 76
           D E ++VS AQE +
Sbjct: 115 DGEAIEVSKAQEAL 128


>ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 643

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/109 (47%), Positives = 72/109 (66%)
 Frame = -2

Query: 402 TNNTFKRYNKPPQPPLFIPPGHVAFRLLCHASRVGGLIGKSGSIIRQLQLLTNSKIRVED 223
           +N + K       PPL IPPGHVAFR+LCHASR+GG+IGKSG +I+QLQ  T  KIRVE+
Sbjct: 36  SNGSSKSKRSKQPPPLIIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEE 95

Query: 222 PADSSDNRVISVVASPLVTKQIKLSPETSVIGDDGDVELVDVSAAQEGI 76
               S +RV++V+ SP +T ++ L   +   G++     V+ S AQEG+
Sbjct: 96  APSESPDRVVTVIGSPALTSRVFLEQNSGASGEE-----VEASKAQEGL 139


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