BLASTX nr result

ID: Scutellaria24_contig00025694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025694
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]   102   3e-20
dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]                 99   5e-19
ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulg...    60   2e-07

>emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]
          Length = 142

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/57 (87%), Positives = 51/57 (89%)
 Frame = -3

Query: 317 RSSKGSRRPTKVRKPGSFRKRIPIRRVHNCMDKLTLTRQFGIQFDIFLGRYREGVGM 147
           RSSKGSRRPTK RK GSFRK IPIRRVHN MDKLTLTRQFGI F IFLGRYREG+GM
Sbjct: 86  RSSKGSRRPTKARKSGSFRKWIPIRRVHNRMDKLTLTRQFGIHFGIFLGRYREGIGM 142


>dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]
          Length = 174

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/58 (86%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
 Frame = -3

Query: 317 RSSKGSRRPTKVRKPGSFRKRIPIRRVHNCMDKLTLTRQFG-IQFDIFLGRYREGVGM 147
           RSSKGSRRPTK RKPGS RK IPIRRVHN MDKLTLTRQFG IQF IFLGRYR+G+GM
Sbjct: 117 RSSKGSRRPTKARKPGSVRKWIPIRRVHNRMDKLTLTRQFGMIQFGIFLGRYRKGIGM 174


>ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435087|ref|YP_004222305.1| hypothetical
           protein BevumaM_p070 [Beta vulgaris subsp. maritima]
           gi|346683178|ref|YP_004842110.1| hypothetical protein
           BemaM_p065 [Beta macrocarpa] gi|9049278|dbj|BAA99288.1|
           orf114a [Beta vulgaris subsp. vulgaris]
           gi|317905640|emb|CBJ14041.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439820|emb|CBJ17532.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500096|emb|CBX24914.1| hypothetical protein [Beta
           macrocarpa] gi|384977899|emb|CBL54123.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 114

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +1

Query: 226 MQLCTLRIGIRFLKDPGFRTLVGLRDPFDDL 318
           M+LCTLRIGI FL DPGFR LVGLRDPFDDL
Sbjct: 1   MRLCTLRIGIHFLTDPGFRALVGLRDPFDDL 31


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