BLASTX nr result

ID: Scutellaria24_contig00025693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025693
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]                 69   5e-10
ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulg...    66   3e-09
emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]    65   7e-09
gb|ABV02394.1| hypothetical chloroplast RF15 [Ipomoea purpurea] ...    55   6e-06

>dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]
          Length = 174

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/76 (57%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
 Frame = +3

Query: 6   TETKCRTGANSSSRKKGLTKPGSLTNTNL-----I**KRTVFSVYFPRFRCYRGL-YAID 167
           TETKCR GANSSSRKKGLT+PGSLTNTNL     I  K  +F +  P     R L    +
Sbjct: 48  TETKCRAGANSSSRKKGLTEPGSLTNTNLIENTNIIEKNCLFCILSPVLLLPRALRNRSE 107

Query: 168 RIR*ISLQHRSSKGSR 215
            I   S QHRSSKGSR
Sbjct: 108 HIDIPSTQHRSSKGSR 123


>ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435087|ref|YP_004222305.1| hypothetical
           protein BevumaM_p070 [Beta vulgaris subsp. maritima]
           gi|346683178|ref|YP_004842110.1| hypothetical protein
           BemaM_p065 [Beta macrocarpa] gi|9049278|dbj|BAA99288.1|
           orf114a [Beta vulgaris subsp. vulgaris]
           gi|317905640|emb|CBJ14041.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439820|emb|CBJ17532.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500096|emb|CBX24914.1| hypothetical protein [Beta
           macrocarpa] gi|384977899|emb|CBL54123.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 114

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/76 (52%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
 Frame = -2

Query: 214 RDPFDDLC*RD-IYLIRSIA*SPR*QRNRGKYTEKT-----VLFYYIRLVLVSDPGLVSP 53
           RDPFDDLC  + I +        R  +  G+  +K      +L + IRLVLVSDPG VSP
Sbjct: 25  RDPFDDLCCVEGISICSDRLRKARGSKRTGESIQKRQFFSIILVFSIRLVLVSDPGSVSP 84

Query: 52  FFRDELLAPVLHFVSV 5
           FFRDELLAP  HFVSV
Sbjct: 85  FFRDELLAPARHFVSV 100


>emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]
          Length = 142

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = +2

Query: 89  SNIIEKNCLFCILPPVPLLSRALRNRSD*IDIPST 193
           +NIIEKNCLFCIL PVPLL RALRNRSD IDIPST
Sbjct: 49  TNIIEKNCLFCILSPVPLLPRALRNRSDHIDIPST 83



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = +3

Query: 24  TGANSSSRKKGLTKPGSLTNTNLI**KRTVFSVYFPRFRCYRGL-YAIDRIR*ISLQHRS 200
           TGANSSSRKKGLT+PGSLTNTN+I  K  +F +  P     R L    D I   S QHRS
Sbjct: 29  TGANSSSRKKGLTEPGSLTNTNII-EKNCLFCILSPVPLLPRALRNRSDHIDIPSTQHRS 87

Query: 201 SKGSR 215
           SKGSR
Sbjct: 88  SKGSR 92


>gb|ABV02394.1| hypothetical chloroplast RF15 [Ipomoea purpurea]
           gi|157056820|gb|ABV02410.1| hypothetical chloroplast
           RF15 [Ipomoea purpurea]
          Length = 56

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +1

Query: 4   PQRQNVGLVPTVHHGRKDSLSRDH 75
           PQRQNVGLVPTVHHGRKDSLSRDH
Sbjct: 33  PQRQNVGLVPTVHHGRKDSLSRDH 56


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