BLASTX nr result

ID: Scutellaria24_contig00025659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025659
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot...   160   1e-37
ref|XP_002307656.1| chromatin remodeling complex subunit [Populu...   151   5e-35
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-...   149   2e-34
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]   149   2e-34
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ...   148   5e-34

>ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
           max]
          Length = 1210

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/118 (65%), Positives = 85/118 (72%)
 Frame = +3

Query: 3   ELHCQRARGIIGDEMGLGKTIQILVFLGSLHFSGMYKPSIIICPVTLLRQWKREAKKWYP 182
           ELHCQRA GIIGDEMGLGKT+Q+L FLG+LHFSGMYKPSII+CPVTLLRQWKREAKKWYP
Sbjct: 405 ELHCQRAGGIIGDEMGLGKTVQVLSFLGALHFSGMYKPSIIVCPVTLLRQWKREAKKWYP 464

Query: 183 SFHVELLHDSVQEISSRKKQXXXXXXXXXXXXXXXXXXXXXXXXXXTNKWESLINRVL 356
            FHVELLHDS Q+ + RKK+                          T KWESLINRV+
Sbjct: 465 KFHVELLHDSAQDSAPRKKRAKSEETDYESNSKSDSDYEKSVASKSTRKWESLINRVM 522


>ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857105|gb|EEE94652.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1206

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/121 (61%), Positives = 84/121 (69%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   ELHCQRARGIIGDEMGLGKTIQILVFLGSLHFSGMYKPSIIICPVTLLRQWKREAKKWYP 182
           ELHCQRA GIIGDEMGLGKTIQ+L FLG+LHFS MYKPSI++CPVTLLRQWKREA+KWYP
Sbjct: 404 ELHCQRAGGIIGDEMGLGKTIQVLSFLGALHFSNMYKPSIVVCPVTLLRQWKREAQKWYP 463

Query: 183 SFHVELLHDSVQEISSR----KKQXXXXXXXXXXXXXXXXXXXXXXXXXXTNKWESLINR 350
            FHVELLHDS Q++S R    KK+                           NKW+SLINR
Sbjct: 464 RFHVELLHDSAQDVSCRDPLKKKRAQSYESDCETEDSLDSDYEGSISCRKANKWDSLINR 523

Query: 351 V 353
           V
Sbjct: 524 V 524


>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
          Length = 1227

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/118 (63%), Positives = 84/118 (71%)
 Frame = +3

Query: 3   ELHCQRARGIIGDEMGLGKTIQILVFLGSLHFSGMYKPSIIICPVTLLRQWKREAKKWYP 182
           ELHCQ+  GIIGDEMGLGKTIQ+L FLG+LHFS MYKPSI+ICPVTLLRQWKREAKKWY 
Sbjct: 414 ELHCQQVGGIIGDEMGLGKTIQVLSFLGALHFSNMYKPSIVICPVTLLRQWKREAKKWYQ 473

Query: 183 SFHVELLHDSVQEISSRKKQXXXXXXXXXXXXXXXXXXXXXXXXXXTNKWESLINRVL 356
           SFHVE+LHDS Q+ +SRKK+                          T KW+SLINRVL
Sbjct: 474 SFHVEILHDSAQDPASRKKR----AKSYESEDSLDSDDEENLSSKDTKKWDSLINRVL 527


>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/118 (63%), Positives = 84/118 (71%)
 Frame = +3

Query: 3   ELHCQRARGIIGDEMGLGKTIQILVFLGSLHFSGMYKPSIIICPVTLLRQWKREAKKWYP 182
           ELHCQ+  GIIGDEMGLGKTIQ+L FLG+LHFS MYKPSI+ICPVTLLRQWKREAKKWY 
Sbjct: 436 ELHCQQVGGIIGDEMGLGKTIQVLSFLGALHFSNMYKPSIVICPVTLLRQWKREAKKWYQ 495

Query: 183 SFHVELLHDSVQEISSRKKQXXXXXXXXXXXXXXXXXXXXXXXXXXTNKWESLINRVL 356
           SFHVE+LHDS Q+ +SRKK+                          T KW+SLINRVL
Sbjct: 496 SFHVEILHDSAQDPASRKKR----AKSYESEDSLDSDDEENLSSKDTKKWDSLINRVL 549


>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
           communis] gi|223530676|gb|EEF32549.1| DNA repair and
           recombination protein RAD26, putative [Ricinus communis]
          Length = 1230

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/118 (62%), Positives = 82/118 (69%)
 Frame = +3

Query: 3   ELHCQRARGIIGDEMGLGKTIQILVFLGSLHFSGMYKPSIIICPVTLLRQWKREAKKWYP 182
           ELHCQRA GIIGDEMGLGKTIQ+L FLG+LHFS MYKPSI+ICPVTLLRQWKREA+KWYP
Sbjct: 413 ELHCQRAGGIIGDEMGLGKTIQVLSFLGALHFSNMYKPSIVICPVTLLRQWKREAEKWYP 472

Query: 183 SFHVELLHDSVQEISSRKKQXXXXXXXXXXXXXXXXXXXXXXXXXXTNKWESLINRVL 356
            FHVELLHDS Q++    K+                           NKW+SLINRVL
Sbjct: 473 RFHVELLHDSAQDL-PHGKRAKSFDSDNESEGSLDSDYEGNISSKKANKWDSLINRVL 529


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