BLASTX nr result

ID: Scutellaria24_contig00025574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025574
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284532.2| PREDICTED: probable NOT transcription comple...   142   3e-32
ref|XP_002530232.1| CCR4-NOT transcription complex subunit, puta...   141   1e-31
emb|CBI16210.3| unnamed protein product [Vitis vinifera]              138   8e-31
ref|NP_001077478.1| CCR4-NOT transcription complex subunit 2 [Ar...   134   9e-30
ref|NP_563795.3| CCR4-NOT transcription complex subunit 2 [Arabi...   134   9e-30

>ref|XP_002284532.2| PREDICTED: probable NOT transcription complex subunit VIP2-like
           [Vitis vinifera]
          Length = 666

 Score =  142 bits (359), Expect = 3e-32
 Identities = 66/107 (61%), Positives = 85/107 (79%)
 Frame = -1

Query: 322 DSTGRXXXXXXXXXXXXXSPVFHHAGNIQGLHNLHGNFNVPNMPGALGSRSTSLNNIASS 143
           DS GR             SPVFHH+G+IQGLHN+HG+FNVPNMPG L SR++++N++ S 
Sbjct: 18  DSNGRSFATSFSAQSGAASPVFHHSGSIQGLHNIHGSFNVPNMPGTLASRNSTINSVPSG 77

Query: 142 GMQQAAGNLSTGRFASNNLPVALSQISHSSAHVHSGMASRGGMSVIG 2
           G+QQ  GNLS+GR+ASN+LPVALSQISH S+H HSG+A+RGG+SV+G
Sbjct: 78  GVQQPTGNLSSGRYASNSLPVALSQISHGSSHGHSGVANRGGISVVG 124


>ref|XP_002530232.1| CCR4-NOT transcription complex subunit, putative [Ricinus communis]
           gi|223530236|gb|EEF32138.1| CCR4-NOT transcription
           complex subunit, putative [Ricinus communis]
          Length = 664

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/108 (62%), Positives = 84/108 (77%)
 Frame = -1

Query: 325 PDSTGRXXXXXXXXXXXXXSPVFHHAGNIQGLHNLHGNFNVPNMPGALGSRSTSLNNIAS 146
           PD+TGR             SPVFHH+G IQGLHN+HG+FNVPNMPG L SR+T+LNN+ S
Sbjct: 17  PDNTGRSFATSFSGQSGAASPVFHHSGTIQGLHNIHGSFNVPNMPGTLTSRNTTLNNVPS 76

Query: 145 SGMQQAAGNLSTGRFASNNLPVALSQISHSSAHVHSGMASRGGMSVIG 2
            G+QQ  G+LS+GRFASNN+PV LSQ+SH S+H HSG+ +RGG+SV+G
Sbjct: 77  GGIQQPTGSLSSGRFASNNIPV-LSQLSHGSSHGHSGVTNRGGISVVG 123


>emb|CBI16210.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  138 bits (347), Expect = 8e-31
 Identities = 64/105 (60%), Positives = 82/105 (78%)
 Frame = -1

Query: 322 DSTGRXXXXXXXXXXXXXSPVFHHAGNIQGLHNLHGNFNVPNMPGALGSRSTSLNNIASS 143
           DS GR             SPVFHH+G+IQGLHN+HG+FNVPNMPG L SR++++N++ S 
Sbjct: 18  DSNGRSFATSFSAQSGAASPVFHHSGSIQGLHNIHGSFNVPNMPGTLASRNSTINSVPSG 77

Query: 142 GMQQAAGNLSTGRFASNNLPVALSQISHSSAHVHSGMASRGGMSV 8
           G+QQ  GNLS+GR+ASN+LPVALSQISH S+H HSG+A+RGG+ V
Sbjct: 78  GVQQPTGNLSSGRYASNSLPVALSQISHGSSHGHSGVANRGGLGV 122


>ref|NP_001077478.1| CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana]
           gi|332190046|gb|AEE28167.1| CCR4-NOT transcription
           complex subunit 2 [Arabidopsis thaliana]
          Length = 614

 Score =  134 bits (338), Expect = 9e-30
 Identities = 62/105 (59%), Positives = 81/105 (77%)
 Frame = -1

Query: 322 DSTGRXXXXXXXXXXXXXSPVFHHAGNIQGLHNLHGNFNVPNMPGALGSRSTSLNNIASS 143
           D +GR             SPVFHHAG+IQGLHN+HGNFNVPN+ G+LGSR++SLN + S+
Sbjct: 18  DGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSLGSRNSSLNGVPSA 77

Query: 142 GMQQAAGNLSTGRFASNNLPVALSQISHSSAHVHSGMASRGGMSV 8
           G+QQ  G++S GRFAS+N+PVALSQ+SH S+H HSG+ +RGG+ V
Sbjct: 78  GVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRGGLGV 122


>ref|NP_563795.3| CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana]
           gi|110738383|dbj|BAF01118.1| hypothetical protein
           [Arabidopsis thaliana] gi|332190045|gb|AEE28166.1|
           CCR4-NOT transcription complex subunit 2 [Arabidopsis
           thaliana]
          Length = 546

 Score =  134 bits (338), Expect = 9e-30
 Identities = 62/105 (59%), Positives = 81/105 (77%)
 Frame = -1

Query: 322 DSTGRXXXXXXXXXXXXXSPVFHHAGNIQGLHNLHGNFNVPNMPGALGSRSTSLNNIASS 143
           D +GR             SPVFHHAG+IQGLHN+HGNFNVPN+ G+LGSR++SLN + S+
Sbjct: 18  DGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSLGSRNSSLNGVPSA 77

Query: 142 GMQQAAGNLSTGRFASNNLPVALSQISHSSAHVHSGMASRGGMSV 8
           G+QQ  G++S GRFAS+N+PVALSQ+SH S+H HSG+ +RGG+ V
Sbjct: 78  GVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRGGLGV 122


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