BLASTX nr result

ID: Scutellaria24_contig00025518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025518
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|2...   335   5e-90
dbj|BAF03493.1| Ku70 homolog [Populus nigra]                          334   8e-90
ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   333   2e-89
ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   322   5e-86
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...   317   1e-84

>ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|222860512|gb|EEE98059.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  335 bits (859), Expect = 5e-90
 Identities = 164/218 (75%), Positives = 190/218 (87%)
 Frame = -1

Query: 658 GILSGTRDNSLYNALWAAQALLRKGSVKTADKRILLFTNEDDPFGNITGVTKMDMMRTTI 479
           GI+SG+R+NSLYNALW AQALLRKGS KTADKRILLFTNEDDPFG+I GV K DM RTT+
Sbjct: 137 GIVSGSRENSLYNALWIAQALLRKGSAKTADKRILLFTNEDDPFGSIKGVAKADMTRTTL 196

Query: 478 QRAKDAQELGISIELLPLSRPDNDFNMSTFYADLLGLEGNDLAEFKALVGERFEDMKDQL 299
           QRAKDAQ+LGISIELLPLS+PD +FN+S FY+DL+GLEG++LA+F    G++ +DMKDQL
Sbjct: 197 QRAKDAQDLGISIELLPLSQPDEEFNVSLFYSDLIGLEGDELAQFMPSAGQKLQDMKDQL 256

Query: 298 RKRMFRKHKVRRINFIIASGISIELNTYALVRPTNPGAITWLDSVTNLPLKTERSFFCAD 119
           RKRMF K  VRRI   IA+G+SIELNTYAL+RPT PGAITWLDSV+N PLKTERSF CAD
Sbjct: 257 RKRMFTKRIVRRITLSIANGLSIELNTYALIRPTLPGAITWLDSVSNRPLKTERSFICAD 316

Query: 118 TGALLQEPPKYFQSYKNDNIIFSADELSVIKRVTTGHL 5
           TGAL+QEP K +Q YKNDNI+ S +ELS IKRV+TGHL
Sbjct: 317 TGALMQEPAKRYQPYKNDNIMLSVEELSEIKRVSTGHL 354


>dbj|BAF03493.1| Ku70 homolog [Populus nigra]
          Length = 627

 Score =  334 bits (857), Expect = 8e-90
 Identities = 164/218 (75%), Positives = 189/218 (86%)
 Frame = -1

Query: 658 GILSGTRDNSLYNALWAAQALLRKGSVKTADKRILLFTNEDDPFGNITGVTKMDMMRTTI 479
           GI+SG+R+NSLYNALW AQALLRKGS KTADKRILLFTNEDDPFG+I GV K DM RTT+
Sbjct: 137 GIVSGSRENSLYNALWIAQALLRKGSAKTADKRILLFTNEDDPFGSIKGVAKADMTRTTL 196

Query: 478 QRAKDAQELGISIELLPLSRPDNDFNMSTFYADLLGLEGNDLAEFKALVGERFEDMKDQL 299
           QRAKDAQ+LGISIELLPLS+PD +FN+S FY+DL+GLEG++LA+F    G++ +DMKDQL
Sbjct: 197 QRAKDAQDLGISIELLPLSQPDEEFNVSLFYSDLIGLEGDELAQFMPSAGQKLQDMKDQL 256

Query: 298 RKRMFRKHKVRRINFIIASGISIELNTYALVRPTNPGAITWLDSVTNLPLKTERSFFCAD 119
           RKRMF K  VRRI   IA+G+SIELNTYAL+RPT PGAITWLDSVTN PLKTERSF CAD
Sbjct: 257 RKRMFTKRIVRRITLSIANGLSIELNTYALIRPTLPGAITWLDSVTNRPLKTERSFICAD 316

Query: 118 TGALLQEPPKYFQSYKNDNIIFSADELSVIKRVTTGHL 5
           TGAL+QEP K +Q YKNDNI+ S +ELS IKRV+ GHL
Sbjct: 317 TGALMQEPAKRYQPYKNDNIMLSVEELSEIKRVSMGHL 354


>ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Vitis
           vinifera] gi|296089629|emb|CBI39448.3| unnamed protein
           product [Vitis vinifera]
          Length = 623

 Score =  333 bits (853), Expect = 2e-89
 Identities = 164/219 (74%), Positives = 188/219 (85%)
 Frame = -1

Query: 658 GILSGTRDNSLYNALWAAQALLRKGSVKTADKRILLFTNEDDPFGNITGVTKMDMMRTTI 479
           GI+SG+R+NSLYNALWAAQALLRKGS KTADKRILLFTNEDDPFG+ITG TKMDM RTT+
Sbjct: 135 GIMSGSRENSLYNALWAAQALLRKGSAKTADKRILLFTNEDDPFGSITGATKMDMTRTTL 194

Query: 478 QRAKDAQELGISIELLPLSRPDNDFNMSTFYADLLGLEGNDLAEFKALVGERFEDMKDQL 299
           QRAKD Q+LGISIELLPLS PD +FN+S FYADL+GLEG+DLA F   VG++  DMK+QL
Sbjct: 195 QRAKDTQDLGISIELLPLSCPDEEFNVSAFYADLIGLEGDDLALFMPSVGDKLTDMKNQL 254

Query: 298 RKRMFRKHKVRRINFIIASGISIELNTYALVRPTNPGAITWLDSVTNLPLKTERSFFCAD 119
           RKRMF+K  VRRI F I  G+SIELNTYAL+RPT PG ITWLDS+TNLPLKTERSF CAD
Sbjct: 255 RKRMFKKRVVRRITFSIVKGLSIELNTYALIRPTVPGTITWLDSITNLPLKTERSFICAD 314

Query: 118 TGALLQEPPKYFQSYKNDNIIFSADELSVIKRVTTGHLR 2
           TGAL+Q P K F  YKN N+ F+ +ELS +KR++TGHLR
Sbjct: 315 TGALVQ-PTKRFHPYKNKNVKFTTEELSEVKRISTGHLR 352


>ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Glycine
           max]
          Length = 633

 Score =  322 bits (824), Expect = 5e-86
 Identities = 158/218 (72%), Positives = 182/218 (83%)
 Frame = -1

Query: 658 GILSGTRDNSLYNALWAAQALLRKGSVKTADKRILLFTNEDDPFGNITGVTKMDMMRTTI 479
           GI+SGTR+NSLYNA+WAAQALLRKGS KT DKRILLFTN+DDPFG+I G  K DM R T+
Sbjct: 143 GIVSGTRENSLYNAIWAAQALLRKGSAKTVDKRILLFTNDDDPFGSIKGAVKSDMTRMTL 202

Query: 478 QRAKDAQELGISIELLPLSRPDNDFNMSTFYADLLGLEGNDLAEFKALVGERFEDMKDQL 299
           QRAKDAQ+LGISIELLPLS PD  FN+S FYADL+GLEG+DL +F    G++ EDMKDQL
Sbjct: 203 QRAKDAQDLGISIELLPLSHPDEVFNVSQFYADLIGLEGDDLVDFMPSAGKKLEDMKDQL 262

Query: 298 RKRMFRKHKVRRINFIIASGISIELNTYALVRPTNPGAITWLDSVTNLPLKTERSFFCAD 119
           RKRMF K  V+R+ F+I +GISIELN+YAL+RPT PGAITWLDSVTN PLK ER+F C D
Sbjct: 263 RKRMFTKRIVKRLKFMIVNGISIELNSYALIRPTVPGAITWLDSVTNHPLKIERTFICVD 322

Query: 118 TGALLQEPPKYFQSYKNDNIIFSADELSVIKRVTTGHL 5
           TGAL++EP K F  YKN NIIFS  +LS IKRV+TGHL
Sbjct: 323 TGALVEEPTKRFLPYKNQNIIFSMKQLSEIKRVSTGHL 360


>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
           gi|223539210|gb|EEF40803.1| ku P70 DNA helicase,
           putative [Ricinus communis]
          Length = 626

 Score =  317 bits (813), Expect = 1e-84
 Identities = 157/219 (71%), Positives = 184/219 (84%)
 Frame = -1

Query: 658 GILSGTRDNSLYNALWAAQALLRKGSVKTADKRILLFTNEDDPFGNITGVTKMDMMRTTI 479
           GI+SG+R+NSLYNALW AQALLRKGS KTADKRILL TNEDDPFG++ G  K DM RTT+
Sbjct: 137 GIVSGSRENSLYNALWVAQALLRKGSAKTADKRILLLTNEDDPFGSMQGAAKTDMTRTTL 196

Query: 478 QRAKDAQELGISIELLPLSRPDNDFNMSTFYADLLGLEGNDLAEFKALVGERFEDMKDQL 299
           QRAKDAQ+LGISIELLPLS+PD +F++S FYA L+GLEG++LA+F    G++ EDMKDQL
Sbjct: 197 QRAKDAQDLGISIELLPLSQPDEEFHISLFYAGLIGLEGDELAQFVPSAGQKLEDMKDQL 256

Query: 298 RKRMFRKHKVRRINFIIASGISIELNTYALVRPTNPGAITWLDSVTNLPLKTERSFFCAD 119
           RKRMF K  VR+I   IA G+SI+LNTYAL+RPT PGAITWLDSVTN PLKTERSF CAD
Sbjct: 257 RKRMFTKRIVRKITLFIA-GLSIDLNTYALIRPTTPGAITWLDSVTNRPLKTERSFICAD 315

Query: 118 TGALLQEPPKYFQSYKNDNIIFSADELSVIKRVTTGHLR 2
           TGAL+ EP K    YKN+NI FS +EL+ IKR++TGHLR
Sbjct: 316 TGALILEPTKLSHPYKNENIKFSVEELAEIKRISTGHLR 354


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