BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025473
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...   113   3e-27
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   120   5e-25
gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japo...   110   4e-22
gb|EEC78111.1| hypothetical protein OsI_17620 [Oryza sativa Indi...   110   4e-22
ref|NP_001054041.1| Os04g0641000 [Oryza sativa Japonica Group] g...   110   4e-22

>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score =  113 bits (283), Expect(2) = 3e-27
 Identities = 74/183 (40%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
 Frame = -1

Query: 585 KASTAFFD------HQINSYNDFVKYGLQEVFDSIGEIMIEPNYNPSKKGDGDWRRASHS 424
           KAS  FF+      HQI+SYNDF++YG+Q VFDS+GEI +EP Y+PSKKG+GDW+ AS  
Sbjct: 74  KASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGDWKHASVK 133

Query: 423 *PTNILYRLKELKKIW---HFSP--GMLDFKT*LIHPRSELRLIFRCTQKVSPEATSSKL 259
                L R     K W    FS   G         H R +  + +     V     + KL
Sbjct: 134 FGKVTLDR----PKFWAGEKFSAYNGEEYLNLWPRHARLQ-NMTYSARIIVETHVFTKKL 188

Query: 258 V*KNLLRR-------KYIVSEYHDVVNFGRLPVMVKSNLCFMKNVEKRDCEFGEGGYFVI 100
           V  +  +        K  V E    V  GR+PVMV S LC+M   ++ DCEF  GGYF++
Sbjct: 189 VRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCEFDHGGYFIV 248

Query: 99  KGA 91
           KGA
Sbjct: 249 KGA 251



 Score = 35.0 bits (79), Expect(2) = 3e-27
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
 Frame = -2

Query: 722 MSSWDFLEEAGPSSICEKFSNGSTKMDFD-----DYVDFNSSDSEDELD 591
           M+  + +E+ G SS  EK SNGST MDFD     +  D++  + EDE D
Sbjct: 7   MTISNIMEDVGCSSGKEKTSNGSTMMDFDVDGLFEVDDYDWDEDEDEDD 55


>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  120 bits (300), Expect = 5e-25
 Identities = 77/185 (41%), Positives = 102/185 (55%), Gaps = 20/185 (10%)
 Frame = -1

Query: 585 KASTAFFD------HQINSYNDFVKYGLQEVFDSIGEIMIEPNYNPSKKGDGDWRRASHS 424
           KAST FF+      HQINSYNDF+ YG+Q VFDS+GEI +EP Y+PSK+GDGDW+ AS  
Sbjct: 66  KASTGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGDWKHASVK 125

Query: 423 *PTNILYRLKELKKIW---HFSPGMLDFKT*LIHPRSELRLI---FRCTQKVSPEATSSK 262
                L    E  K W    FS G       L+   + L+ +    R   +   +  + K
Sbjct: 126 FGKVTL----ERPKFWAGEKFSVGGGKEYLDLLPRHARLQNMTYSARIMVETHVQVYTKK 181

Query: 261 LV*KNLLR--------RKYIVSEYHDVVNFGRLPVMVKSNLCFMKNVEKRDCEFGEGGYF 106
           LV  +  +        +++ V    DV+  GR+PVMV S LC+M  V+K DCEF  GGYF
Sbjct: 182 LVRSDKFKTGVDRFVDKEWEVEGKRDVL-IGRIPVMVNSELCWMNGVDKLDCEFDHGGYF 240

Query: 105 VIKGA 91
           + KGA
Sbjct: 241 IAKGA 245


>gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japonica Group]
          Length = 1185

 Score =  110 bits (275), Expect = 4e-22
 Identities = 66/181 (36%), Positives = 106/181 (58%), Gaps = 17/181 (9%)
 Frame = -1

Query: 585 KASTAFFD------HQINSYNDFVKYGLQEVFDSIGEIMIEPNYNPSKKGDGDWRRASHS 424
           +AS +FFD      HQINSYN+FV +GLQE+FDS+GE+ +EP+Y+PS +G G WR A   
Sbjct: 89  EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGWRHAI-- 146

Query: 423 *PTNILYRLKELKKIWHFSPGM-LDFKT*LIHPR----------SELRLIFRCTQKVSPE 277
               I +   +L++   +S G  +D ++  + PR          S++++          +
Sbjct: 147 ----IKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEK 202

Query: 276 ATSSKLV*KNLLRRKYIVSEYHDVVNFGRLPVMVKSNLCFMKNVEKRDCEFGEGGYFVIK 97
           +  +K        ++ I++E +  +N GRLPVMV SNLC++  +++ DC+F  GGYF+IK
Sbjct: 203 SDKAKTGNDKFGYKRNIINETY-YINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIK 261

Query: 96  G 94
           G
Sbjct: 262 G 262


>gb|EEC78111.1| hypothetical protein OsI_17620 [Oryza sativa Indica Group]
          Length = 1177

 Score =  110 bits (275), Expect = 4e-22
 Identities = 66/181 (36%), Positives = 106/181 (58%), Gaps = 17/181 (9%)
 Frame = -1

Query: 585 KASTAFFD------HQINSYNDFVKYGLQEVFDSIGEIMIEPNYNPSKKGDGDWRRASHS 424
           +AS +FFD      HQINSYN+FV +GLQE+FDS+GE+ +EP+Y+PS +G G WR A   
Sbjct: 89  EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGWRHAI-- 146

Query: 423 *PTNILYRLKELKKIWHFSPGM-LDFKT*LIHPR----------SELRLIFRCTQKVSPE 277
               I +   +L++   +S G  +D ++  + PR          S++++          +
Sbjct: 147 ----IKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEK 202

Query: 276 ATSSKLV*KNLLRRKYIVSEYHDVVNFGRLPVMVKSNLCFMKNVEKRDCEFGEGGYFVIK 97
           +  +K        ++ I++E +  +N GRLPVMV SNLC++  +++ DC+F  GGYF+IK
Sbjct: 203 SDKAKTGNDKFGYKRNIINETY-YINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIK 261

Query: 96  G 94
           G
Sbjct: 262 G 262


>ref|NP_001054041.1| Os04g0641000 [Oryza sativa Japonica Group]
           gi|113565612|dbj|BAF15955.1| Os04g0641000, partial
           [Oryza sativa Japonica Group]
          Length = 1270

 Score =  110 bits (275), Expect = 4e-22
 Identities = 66/181 (36%), Positives = 106/181 (58%), Gaps = 17/181 (9%)
 Frame = -1

Query: 585 KASTAFFD------HQINSYNDFVKYGLQEVFDSIGEIMIEPNYNPSKKGDGDWRRASHS 424
           +AS +FFD      HQINSYN+FV +GLQE+FDS+GE+ +EP+Y+PS +G G WR A   
Sbjct: 107 EASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGWRHAI-- 164

Query: 423 *PTNILYRLKELKKIWHFSPGM-LDFKT*LIHPR----------SELRLIFRCTQKVSPE 277
               I +   +L++   +S G  +D ++  + PR          S++++          +
Sbjct: 165 ----IKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEK 220

Query: 276 ATSSKLV*KNLLRRKYIVSEYHDVVNFGRLPVMVKSNLCFMKNVEKRDCEFGEGGYFVIK 97
           +  +K        ++ I++E +  +N GRLPVMV SNLC++  +++ DC+F  GGYF+IK
Sbjct: 221 SDKAKTGNDKFGYKRNIINETY-YINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIK 279

Query: 96  G 94
           G
Sbjct: 280 G 280