BLASTX nr result

ID: Scutellaria24_contig00025426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025426
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   185   3e-45
ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-42
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
ref|XP_002879907.1| pentatricopeptide repeat-containing protein ...   165   4e-39

>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/125 (68%), Positives = 106/125 (84%)
 Frame = -1

Query: 376 EGFIRSMPINPDSITWKTLLSACKVYKNAEMAKRVAEEILRIDPQDSASYVLLSNIHATA 197
           EG IRSMP+ PD I WKTLL+ACK++K AEMA+R++EEI+++DP D+ASYVLLSNIHA+A
Sbjct: 452 EGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASA 511

Query: 196 RRWGDVSDVRRKMREMTVKKEPGMSWYELKNQVHLFVMGDKSHPQAEEIDLYLKELTAEL 17
           R W +VS +R+ MR+ +V+KEPG+SW ELKN VH F MGDKSHPQ  EIDLYLKEL +EL
Sbjct: 512 RNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSEL 571

Query: 16  RSHGY 2
           + HGY
Sbjct: 572 KQHGY 576


>ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|222867440|gb|EEF04571.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/125 (66%), Positives = 102/125 (81%)
 Frame = -1

Query: 376 EGFIRSMPINPDSITWKTLLSACKVYKNAEMAKRVAEEILRIDPQDSASYVLLSNIHATA 197
           E  IRSMP+  D + WKTLLSAC++++NA+MA R AEEILR++PQDSA+YVLLSNIHA+A
Sbjct: 347 EAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASA 406

Query: 196 RRWGDVSDVRRKMREMTVKKEPGMSWYELKNQVHLFVMGDKSHPQAEEIDLYLKELTAEL 17
           +RW DVS VR  MR+  VKKEPG+SW E+KN+V  F MGDKSHP +EEIDLYLKEL  E+
Sbjct: 407 KRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEM 466

Query: 16  RSHGY 2
           +  GY
Sbjct: 467 KLRGY 471


>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  176 bits (447), Expect = 1e-42
 Identities = 81/125 (64%), Positives = 106/125 (84%)
 Frame = -1

Query: 376 EGFIRSMPINPDSITWKTLLSACKVYKNAEMAKRVAEEILRIDPQDSASYVLLSNIHATA 197
           E  IRSMP+  D+I WKTLLSACK++KNAE+A+RVA+E+LRIDPQDSASYVLL+NI+++A
Sbjct: 459 EAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSA 518

Query: 196 RRWGDVSDVRRKMREMTVKKEPGMSWYELKNQVHLFVMGDKSHPQAEEIDLYLKELTAEL 17
            RW +VS+VRR M++  VKKEPG+SW E+KNQVH F MGD+ HP+  EI+ YL+ELT+E+
Sbjct: 519 NRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEI 578

Query: 16  RSHGY 2
           +  GY
Sbjct: 579 KRQGY 583


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  176 bits (446), Expect = 2e-42
 Identities = 78/125 (62%), Positives = 101/125 (80%)
 Frame = -1

Query: 376 EGFIRSMPINPDSITWKTLLSACKVYKNAEMAKRVAEEILRIDPQDSASYVLLSNIHATA 197
           E  IRSMP+  D ITWKTLLSACK++K  EMA+R++EE+ R+DP+D   YVLLSNIHA+ 
Sbjct: 442 EALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASD 501

Query: 196 RRWGDVSDVRRKMREMTVKKEPGMSWYELKNQVHLFVMGDKSHPQAEEIDLYLKELTAEL 17
           +RW DVSDVR+ MR+  +KKEPG+SW E+KNQ+H F MGDKSHP++ EI  YL+ELT+E+
Sbjct: 502 KRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEM 561

Query: 16  RSHGY 2
           +  GY
Sbjct: 562 KKRGY 566


>ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325746|gb|EFH56166.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 565

 Score =  165 bits (417), Expect = 4e-39
 Identities = 76/125 (60%), Positives = 99/125 (79%)
 Frame = -1

Query: 376 EGFIRSMPINPDSITWKTLLSACKVYKNAEMAKRVAEEILRIDPQDSASYVLLSNIHATA 197
           E  I+SMPI PD + WKTLLSAC ++KNAEMA++V +EIL IDP DSA YVLL+N+HA+A
Sbjct: 350 EAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILEIDPNDSACYVLLANVHASA 409

Query: 196 RRWGDVSDVRRKMREMTVKKEPGMSWYELKNQVHLFVMGDKSHPQAEEIDLYLKELTAEL 17
           +RW DVS+VR+ MR+  VKKE G+SW+E K +VH F MGD+S  +++EI  YLKELT E+
Sbjct: 410 KRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEM 469

Query: 16  RSHGY 2
           +  GY
Sbjct: 470 KLKGY 474


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