BLASTX nr result

ID: Scutellaria24_contig00025419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025419
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284049.1| PREDICTED: E3 ubiquitin-protein ligase UPL7 ...    80   1e-13
ref|XP_002322903.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_003553574.1| PREDICTED: E3 ubiquitin-protein ligase UPL7 ...    73   3e-11
ref|XP_002528627.1| ubiquitin-protein ligase, putative [Ricinus ...    73   3e-11
ref|XP_002876188.1| ubiquitin-protein ligase 7 [Arabidopsis lyra...    72   5e-11

>ref|XP_002284049.1| PREDICTED: E3 ubiquitin-protein ligase UPL7 [Vitis vinifera]
           gi|297740027|emb|CBI30209.3| unnamed protein product
           [Vitis vinifera]
          Length = 1161

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/62 (67%), Positives = 49/62 (79%)
 Frame = -1

Query: 287 MNKSRRHQVSLRGASAKEITRDALLEKVNQERELRNYTRRANAAVLIIQMYIRAFAQWQL 108
           M+  R+HQVSLRGASAKEITRDALLEKV+QERELRNY RRA AA + IQ   R +   ++
Sbjct: 1   MDDHRKHQVSLRGASAKEITRDALLEKVSQERELRNYVRRATAAAIFIQRVWRRYNVIKM 60

Query: 107 VA 102
           VA
Sbjct: 61  VA 62


>ref|XP_002322903.1| predicted protein [Populus trichocarpa] gi|222867533|gb|EEF04664.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/59 (64%), Positives = 46/59 (77%)
 Frame = -1

Query: 278 SRRHQVSLRGASAKEITRDALLEKVNQERELRNYTRRANAAVLIIQMYIRAFAQWQLVA 102
           SR+HQVSLRGASA+EI+RDALL+KV+ ERELRNY RRA A+ + IQ   R F   + VA
Sbjct: 6   SRKHQVSLRGASAREISRDALLQKVSHERELRNYARRATASAIFIQRVWRRFIVTKKVA 64



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/47 (51%), Positives = 36/47 (76%)
 Frame = -3

Query: 141 DVHQSFCSMATGSIEERRLWLHQSKKLISVCLFVLSLFDYSHQRVQD 1
           D+  +FC++A G++EERR W +QS+KL+S+C  +L+  D SHQR QD
Sbjct: 135 DLGNNFCALALGTLEERRTWTYQSQKLVSLCSIILANCDKSHQRAQD 181


>ref|XP_003553574.1| PREDICTED: E3 ubiquitin-protein ligase UPL7 [Glycine max]
          Length = 1157

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/62 (59%), Positives = 48/62 (77%)
 Frame = -1

Query: 287 MNKSRRHQVSLRGASAKEITRDALLEKVNQERELRNYTRRANAAVLIIQMYIRAFAQWQL 108
           M+  R+ QVSLRGASAKEITRDALL+KV++ERELRNY +RA +A L IQ   R F   ++
Sbjct: 1   MDAPRKQQVSLRGASAKEITRDALLQKVSRERELRNYAKRAASAALFIQRVWRRFKVTKM 60

Query: 107 VA 102
           ++
Sbjct: 61  IS 62


>ref|XP_002528627.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223531916|gb|EEF33730.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 1148

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/62 (61%), Positives = 47/62 (75%)
 Frame = -1

Query: 287 MNKSRRHQVSLRGASAKEITRDALLEKVNQERELRNYTRRANAAVLIIQMYIRAFAQWQL 108
           M++ RRHQVSLRGASA+EI+RDALLEKV  ERELR+Y RRA A+ + IQ   R +   + 
Sbjct: 1   MDEPRRHQVSLRGASAREISRDALLEKVYHERELRSYARRATASAIFIQRVWRRYIVTKK 60

Query: 107 VA 102
           VA
Sbjct: 61  VA 62



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = -3

Query: 141 DVHQSFCSMATGSIEERRLWLHQSKKLISVCLFVLSLFDYSH 16
           D  ++FCS++ GS+EERR+W  QSKKLI +C F+LS  D SH
Sbjct: 130 DSRKNFCSLSVGSLEERRMWTFQSKKLICLCSFILSECDKSH 171


>ref|XP_002876188.1| ubiquitin-protein ligase 7 [Arabidopsis lyrata subsp. lyrata]
           gi|297322026|gb|EFH52447.1| ubiquitin-protein ligase 7
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1130

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/55 (65%), Positives = 46/55 (83%)
 Frame = -1

Query: 287 MNKSRRHQVSLRGASAKEITRDALLEKVNQERELRNYTRRANAAVLIIQMYIRAF 123
           M+ +R+H+VSLRGAS+ EI+RDALL KV+QERELR+Y RRANAA L IQ   R++
Sbjct: 1   MDLNRKHKVSLRGASSGEISRDALLAKVSQERELRSYARRANAAALFIQRVWRSY 55


Top