BLASTX nr result

ID: Scutellaria24_contig00025411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025411
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510735.1| transcription factor, putative [Ricinus comm...   116   2e-24
ref|XP_002300618.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|NP_179333.2| ARID/BRIGHT DNA-binding domain-containing prote...   108   6e-22
dbj|BAD44145.1| hypothetical protein [Arabidopsis thaliana]           108   6e-22
ref|NP_001189540.1| ARID/BRIGHT DNA-binding domain-containing pr...   108   6e-22

>ref|XP_002510735.1| transcription factor, putative [Ricinus communis]
           gi|223551436|gb|EEF52922.1| transcription factor,
           putative [Ricinus communis]
          Length = 449

 Score =  116 bits (290), Expect = 2e-24
 Identities = 67/131 (51%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
 Frame = -3

Query: 382 VTDGNTKTVEAAIKHEGDNSCLPNQHE---AATPNALVLYSPANVGGDHSGETVKTAFTQ 212
           V D N+  V  + K +GD   + +      A TP A   YS      + SG   K  +T 
Sbjct: 83  VNDANSIKVRES-KDDGDGGTIVHDQPEALAVTPLAPRKYSTPRAKHE-SGAKSKGVWTD 140

Query: 211 ATLPPMGESDD-GIPEEQAAFMRELESFYRERAMDFKPPKFYGQPLNCLKLWRAVIRLGG 35
                MGE+D+ G PEE+AAFMRELE+F++E A++FKPPKFYG+PLNCLKLWR+VIRLGG
Sbjct: 141 VE---MGEADESGTPEERAAFMRELETFHKENALEFKPPKFYGEPLNCLKLWRSVIRLGG 197

Query: 34  YDRVTGSKLWR 2
           Y+ VT SKLWR
Sbjct: 198 YEVVTASKLWR 208


>ref|XP_002300618.1| predicted protein [Populus trichocarpa] gi|222842344|gb|EEE79891.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  108 bits (270), Expect = 4e-22
 Identities = 48/66 (72%), Positives = 59/66 (89%), Gaps = 1/66 (1%)
 Frame = -3

Query: 196 MGESD-DGIPEEQAAFMRELESFYRERAMDFKPPKFYGQPLNCLKLWRAVIRLGGYDRVT 20
           MGE+D  G PEE+AAFM+ELE+FY++  MDFKPPKFYG+PLNCLKLWR+VI+LGGY+ VT
Sbjct: 1   MGEADVAGTPEERAAFMKELETFYKQNTMDFKPPKFYGEPLNCLKLWRSVIKLGGYEVVT 60

Query: 19  GSKLWR 2
            +KLWR
Sbjct: 61  ANKLWR 66


>ref|NP_179333.2| ARID/BRIGHT DNA-binding domain-containing protein [Arabidopsis
           thaliana] gi|75249512|sp|Q940Y3.1|ARID3_ARATH RecName:
           Full=AT-rich interactive domain-containing protein 3;
           Short=ARID domain-containing protein 3
           gi|15450515|gb|AAK96550.1| At2g17400 [Arabidopsis
           thaliana] gi|27363260|gb|AAO11549.1| At2g17400/At2g17400
           [Arabidopsis thaliana] gi|110740376|dbj|BAF02083.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330251527|gb|AEC06621.1| ARID/BRIGHT DNA-binding
           domain-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  108 bits (269), Expect = 6e-22
 Identities = 47/62 (75%), Positives = 56/62 (90%)
 Frame = -3

Query: 187 SDDGIPEEQAAFMRELESFYRERAMDFKPPKFYGQPLNCLKLWRAVIRLGGYDRVTGSKL 8
           ++ G  E+Q+AFM+EL+SF+RER MDFKPPKFYG+ LNCLKLWRAV RLGGYD+VTGSKL
Sbjct: 489 NESGTEEDQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKL 548

Query: 7   WR 2
           WR
Sbjct: 549 WR 550


>dbj|BAD44145.1| hypothetical protein [Arabidopsis thaliana]
          Length = 786

 Score =  108 bits (269), Expect = 6e-22
 Identities = 47/62 (75%), Positives = 56/62 (90%)
 Frame = -3

Query: 187 SDDGIPEEQAAFMRELESFYRERAMDFKPPKFYGQPLNCLKLWRAVIRLGGYDRVTGSKL 8
           ++ G  E+Q+AFM+EL+SF+RER MDFKPPKFYG+ LNCLKLWRAV RLGGYD+VTGSKL
Sbjct: 489 NESGTEEDQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKL 548

Query: 7   WR 2
           WR
Sbjct: 549 WR 550


>ref|NP_001189540.1| ARID/BRIGHT DNA-binding domain-containing protein [Arabidopsis
           thaliana] gi|330251528|gb|AEC06622.1| ARID/BRIGHT
           DNA-binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 780

 Score =  108 bits (269), Expect = 6e-22
 Identities = 47/62 (75%), Positives = 56/62 (90%)
 Frame = -3

Query: 187 SDDGIPEEQAAFMRELESFYRERAMDFKPPKFYGQPLNCLKLWRAVIRLGGYDRVTGSKL 8
           ++ G  E+Q+AFM+EL+SF+RER MDFKPPKFYG+ LNCLKLWRAV RLGGYD+VTGSKL
Sbjct: 489 NESGTEEDQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKVTGSKL 548

Query: 7   WR 2
           WR
Sbjct: 549 WR 550


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