BLASTX nr result

ID: Scutellaria24_contig00025379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025379
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316177.1| tubulin gamma complex-associated protein [Po...   155   2e-36
ref|XP_002529877.1| gamma-tubulin complex component, putative [R...   153   2e-35
ref|XP_002871765.1| hypothetical protein ARALYDRAFT_488606 [Arab...   151   5e-35
ref|NP_568346.1| Spc97 / Spc98 family of spindle pole body (SBP)...   151   6e-35
ref|NP_850838.1| Spc97 / Spc98 family of spindle pole body (SBP)...   147   9e-34

>ref|XP_002316177.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222865217|gb|EEF02348.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 711

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/105 (73%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   PKWNADRPFLTGRFHQETKSASGIAESKGFSADLFGPE-VDKPIGCYHAAIQELIVIDDL 179
           P+WN DRPFLTGRFHQETK  S +A++KGFS DL     +++PIG Y+AA+QELIVIDDL
Sbjct: 15  PRWNIDRPFLTGRFHQETKGTSRLADTKGFSMDLSSSHGLERPIGYYNAAVQELIVIDDL 74

Query: 180 LSALVGIEGRYISIRRVHGKDDAASFQVDASMDLALQESAKRVFP 314
           LSA+VGIEGRYISIRRV GK+D  SFQVDASMDLA+QE AKR+FP
Sbjct: 75  LSAMVGIEGRYISIRRVRGKEDHISFQVDASMDLAIQELAKRMFP 119


>ref|XP_002529877.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223530653|gb|EEF32527.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 713

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/104 (72%), Positives = 88/104 (84%)
 Frame = +3

Query: 3   PKWNADRPFLTGRFHQETKSASGIAESKGFSADLFGPEVDKPIGCYHAAIQELIVIDDLL 182
           P+WN +RPFLTGRF QETK+ S + +SKGFS     P +DK IGCY AA+QELIVIDDL+
Sbjct: 14  PRWNVERPFLTGRFRQETKATSRLTDSKGFSFST--PGLDKAIGCYDAAVQELIVIDDLM 71

Query: 183 SALVGIEGRYISIRRVHGKDDAASFQVDASMDLALQESAKRVFP 314
           SALVGIEGRYISI+RVHGK+D  +FQ+DASMDLALQE AKR+FP
Sbjct: 72  SALVGIEGRYISIKRVHGKEDDITFQLDASMDLALQELAKRMFP 115


>ref|XP_002871765.1| hypothetical protein ARALYDRAFT_488606 [Arabidopsis lyrata subsp.
           lyrata] gi|297317602|gb|EFH48024.1| hypothetical protein
           ARALYDRAFT_488606 [Arabidopsis lyrata subsp. lyrata]
          Length = 678

 Score =  151 bits (382), Expect = 5e-35
 Identities = 73/104 (70%), Positives = 86/104 (82%)
 Frame = +3

Query: 3   PKWNADRPFLTGRFHQETKSASGIAESKGFSADLFGPEVDKPIGCYHAAIQELIVIDDLL 182
           P+WN DRPFLTGRFHQET+++S  A+SK F+ D     V++ IGCY   +QELIVIDDLL
Sbjct: 13  PRWNQDRPFLTGRFHQETRASSKFADSKRFTLDSSSSGVEQAIGCYDTPVQELIVIDDLL 72

Query: 183 SALVGIEGRYISIRRVHGKDDAASFQVDASMDLALQESAKRVFP 314
           SALVGIEGRYISI+R HGK+D+ +FQVD SMDLALQE AKRVFP
Sbjct: 73  SALVGIEGRYISIKRFHGKEDSIAFQVDPSMDLALQELAKRVFP 116


>ref|NP_568346.1| Spc97 / Spc98 family of spindle pole body (SBP) component
           [Arabidopsis thaliana]
           gi|13430652|gb|AAK25948.1|AF360238_1 putative spindle
           pole body protein [Arabidopsis thaliana]
           gi|14532826|gb|AAK64095.1| putative spindle pole body
           protein [Arabidopsis thaliana]
           gi|332005040|gb|AED92423.1| Spc97 / Spc98 family of
           spindle pole body (SBP) component [Arabidopsis thaliana]
          Length = 678

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/104 (69%), Positives = 86/104 (82%)
 Frame = +3

Query: 3   PKWNADRPFLTGRFHQETKSASGIAESKGFSADLFGPEVDKPIGCYHAAIQELIVIDDLL 182
           P+WN DRPFLTGRFHQET+++S  A+SK F+ D     V++ IGCY   +QELIVIDDLL
Sbjct: 13  PRWNQDRPFLTGRFHQETRASSKFADSKRFTLDSSSSGVEQAIGCYDTPVQELIVIDDLL 72

Query: 183 SALVGIEGRYISIRRVHGKDDAASFQVDASMDLALQESAKRVFP 314
           SALVGIEGRYISI+R HGK+D+ +FQVD SMDLALQE AKR+FP
Sbjct: 73  SALVGIEGRYISIKRFHGKEDSIAFQVDPSMDLALQELAKRIFP 116


>ref|NP_850838.1| Spc97 / Spc98 family of spindle pole body (SBP) component
           [Arabidopsis thaliana] gi|332005039|gb|AED92422.1| Spc97
           / Spc98 family of spindle pole body (SBP) component
           [Arabidopsis thaliana]
          Length = 679

 Score =  147 bits (371), Expect = 9e-34
 Identities = 72/105 (68%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   PKWNADRPFLTGRFHQETKSASGIAESKGFSADLFGPE-VDKPIGCYHAAIQELIVIDDL 179
           P+WN DRPFLTGRFHQET+++S  A+SK F+ D      V++ IGCY   +QELIVIDDL
Sbjct: 13  PRWNQDRPFLTGRFHQETRASSKFADSKRFTLDSSSSSGVEQAIGCYDTPVQELIVIDDL 72

Query: 180 LSALVGIEGRYISIRRVHGKDDAASFQVDASMDLALQESAKRVFP 314
           LSALVGIEGRYISI+R HGK+D+ +FQVD SMDLALQE AKR+FP
Sbjct: 73  LSALVGIEGRYISIKRFHGKEDSIAFQVDPSMDLALQELAKRIFP 117


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