BLASTX nr result

ID: Scutellaria24_contig00025348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025348
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II tra...   131   5e-29
ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II tra...   131   5e-29
ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247...   131   7e-29
ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254...   129   2e-28
emb|CBI32346.3| unnamed protein product [Vitis vinifera]              129   2e-28

>ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like [Cucumis sativus]
          Length = 739

 Score =  131 bits (330), Expect = 5e-29
 Identities = 60/81 (74%), Positives = 73/81 (90%)
 Frame = +1

Query: 136 LWDAVLELTKSAQERGTDPLLWSMQLSSSLTGAGVSMPSVEVAELLVSHICWSNNLPIAW 315
           LWD VLELTKSAQ++  DPLLW++QLSS+L  AGVS+PSVE+A+LLVSHICW N++PI W
Sbjct: 17  LWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPIMW 76

Query: 316 KFLEKALTIRIVPPMLVLALL 378
           KFLEKA+T RIVPP+LV+ALL
Sbjct: 77  KFLEKAMTARIVPPLLVIALL 97


>ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like [Cucumis sativus]
          Length = 1335

 Score =  131 bits (330), Expect = 5e-29
 Identities = 60/81 (74%), Positives = 73/81 (90%)
 Frame = +1

Query: 136 LWDAVLELTKSAQERGTDPLLWSMQLSSSLTGAGVSMPSVEVAELLVSHICWSNNLPIAW 315
           LWD VLELTKSAQ++  DPLLW++QLSS+L  AGVS+PSVE+A+LLVSHICW N++PI W
Sbjct: 17  LWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPIMW 76

Query: 316 KFLEKALTIRIVPPMLVLALL 378
           KFLEKA+T RIVPP+LV+ALL
Sbjct: 77  KFLEKAMTARIVPPLLVIALL 97


>ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247741 [Vitis vinifera]
           gi|297736973|emb|CBI26174.3| unnamed protein product
           [Vitis vinifera]
          Length = 1305

 Score =  131 bits (329), Expect = 7e-29
 Identities = 62/81 (76%), Positives = 72/81 (88%)
 Frame = +1

Query: 136 LWDAVLELTKSAQERGTDPLLWSMQLSSSLTGAGVSMPSVEVAELLVSHICWSNNLPIAW 315
           +WD +LE T  AQE+G+DPLLW++QLSSSL+ AGVS+PSVEVA LLVSHICW NN+PIAW
Sbjct: 9   IWDNILEHTNVAQEKGSDPLLWAVQLSSSLSSAGVSLPSVEVANLLVSHICWGNNVPIAW 68

Query: 316 KFLEKALTIRIVPPMLVLALL 378
           KFLEKAL I+IVPPM VLALL
Sbjct: 69  KFLEKALMIKIVPPMPVLALL 89


>ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254459 [Vitis vinifera]
          Length = 1321

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/81 (75%), Positives = 71/81 (87%)
 Frame = +1

Query: 136 LWDAVLELTKSAQERGTDPLLWSMQLSSSLTGAGVSMPSVEVAELLVSHICWSNNLPIAW 315
           LWD+VLELTKSAQER +DPLLW++QLSS L  AG S+PS E+A LLVSHICW+NN+PI W
Sbjct: 19  LWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANNVPITW 78

Query: 316 KFLEKALTIRIVPPMLVLALL 378
           KFLEKA++ RI PPMLVLALL
Sbjct: 79  KFLEKAVSGRIAPPMLVLALL 99


>emb|CBI32346.3| unnamed protein product [Vitis vinifera]
          Length = 1388

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/81 (75%), Positives = 71/81 (87%)
 Frame = +1

Query: 136 LWDAVLELTKSAQERGTDPLLWSMQLSSSLTGAGVSMPSVEVAELLVSHICWSNNLPIAW 315
           LWD+VLELTKSAQER +DPLLW++QLSS L  AG S+PS E+A LLVSHICW+NN+PI W
Sbjct: 70  LWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANNVPITW 129

Query: 316 KFLEKALTIRIVPPMLVLALL 378
           KFLEKA++ RI PPMLVLALL
Sbjct: 130 KFLEKAVSGRIAPPMLVLALL 150


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