BLASTX nr result

ID: Scutellaria24_contig00025343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025343
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ...   150   1e-34
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-...   144   1e-32
ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-...   140   8e-32
ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31

>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
          Length = 902

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/81 (86%), Positives = 75/81 (92%)
 Frame = +2

Query: 2   TSTYDGFGLAWAICEHIVEVIEAPTLFATHFHELTALAHETTSNEQSSKKLTGVANYHVS 181
           TSTYDGFGLAWAICEHIVEVI+APTLFATHFHELTALAHE T ++   K++ GVANYHVS
Sbjct: 711 TSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALAHENTDHQPPEKQIVGVANYHVS 770

Query: 182 AHIDSSSRKLTMLYKVEPGAC 244
           AHIDSSSRKLTMLYKVEPGAC
Sbjct: 771 AHIDSSSRKLTMLYKVEPGAC 791


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/81 (86%), Positives = 75/81 (92%)
 Frame = +2

Query: 2   TSTYDGFGLAWAICEHIVEVIEAPTLFATHFHELTALAHETTSNEQSSKKLTGVANYHVS 181
           TSTYDGFGLAWAICEHIVEVI+APTLFATHFHELTALAHE T ++   K++ GVANYHVS
Sbjct: 751 TSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALAHENTDHQPPEKQIVGVANYHVS 810

Query: 182 AHIDSSSRKLTMLYKVEPGAC 244
           AHIDSSSRKLTMLYKVEPGAC
Sbjct: 811 AHIDSSSRKLTMLYKVEPGAC 831


>ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max]
          Length = 942

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/81 (86%), Positives = 75/81 (92%)
 Frame = +2

Query: 2   TSTYDGFGLAWAICEHIVEVIEAPTLFATHFHELTALAHETTSNEQSSKKLTGVANYHVS 181
           TSTYDGFGLAWAICEHIVEVI+APTLFATHFHELTALA E  SN+ S K++ GVANYHVS
Sbjct: 752 TSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTALALENVSND-SQKQIVGVANYHVS 810

Query: 182 AHIDSSSRKLTMLYKVEPGAC 244
           AHIDSS+RKLTMLYKVEPGAC
Sbjct: 811 AHIDSSTRKLTMLYKVEPGAC 831


>ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-like [Cucumis sativus]
           gi|449477104|ref|XP_004154930.1| PREDICTED: DNA mismatch
           repair protein MSH2-like [Cucumis sativus]
          Length = 938

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/81 (80%), Positives = 72/81 (88%)
 Frame = +2

Query: 2   TSTYDGFGLAWAICEHIVEVIEAPTLFATHFHELTALAHETTSNEQSSKKLTGVANYHVS 181
           TSTYDGFGLAWAICEH+VEVI+APTLFATHFHELTALAH  T  +   K++ GVAN+HVS
Sbjct: 751 TSTYDGFGLAWAICEHLVEVIKAPTLFATHFHELTALAHGNTDLDSHGKQMAGVANFHVS 810

Query: 182 AHIDSSSRKLTMLYKVEPGAC 244
           AHIDSS+ KLTMLYKVEPGAC
Sbjct: 811 AHIDSSNHKLTMLYKVEPGAC 831


>ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|222858604|gb|EEE96151.1|
           predicted protein [Populus trichocarpa]
          Length = 944

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/81 (77%), Positives = 71/81 (87%)
 Frame = +2

Query: 2   TSTYDGFGLAWAICEHIVEVIEAPTLFATHFHELTALAHETTSNEQSSKKLTGVANYHVS 181
           TSTYDGFGLAWAICEH+V  ++APTLFATHFHELTALAH+    E  +K++ GVANYHVS
Sbjct: 753 TSTYDGFGLAWAICEHLVRELKAPTLFATHFHELTALAHQKPDQEPHAKQIVGVANYHVS 812

Query: 182 AHIDSSSRKLTMLYKVEPGAC 244
           AHIDSS+ KLTMLYKVEPGAC
Sbjct: 813 AHIDSSNHKLTMLYKVEPGAC 833


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