BLASTX nr result

ID: Scutellaria24_contig00025306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025306
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like pr...    96   4e-18
ref|XP_002510746.1| Squamosa promoter-binding protein, putative ...    94   9e-18
emb|CBI40788.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002307005.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002301891.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10

>ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Vitis
           vinifera]
          Length = 1070

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 6/92 (6%)
 Frame = -2

Query: 260 MEEAGAQVVAPVVMHQHLAARYCDSYPMAKKRALPFHSSSFLQ------QNTSDNWNPKS 99
           MEE GAQV  P+ +HQ L++R+ ++ PMAKKR LP+ SS+F        QN  DNWNPK 
Sbjct: 1   MEEVGAQVAPPIFIHQTLSSRFHEAVPMAKKRDLPYPSSNFQHQHPQRFQNPRDNWNPKV 60

Query: 98  WNWDSARFVAKPLQYDGVQVGTGEEVQLVLPR 3
           W+WDS RFVA PL+ + +++GT   VQ  L +
Sbjct: 61  WDWDSVRFVANPLESELLRLGTATPVQTELKK 92


>ref|XP_002510746.1| Squamosa promoter-binding protein, putative [Ricinus communis]
           gi|223551447|gb|EEF52933.1| Squamosa promoter-binding
           protein, putative [Ricinus communis]
          Length = 1073

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 6/82 (7%)
 Frame = -2

Query: 260 MEEAGAQVVAPVVMHQHLAARYCDSYPMAKKRALPFHSSSF----LQQNTSDNWNPKSWN 93
           MEE GAQV +P+ +HQ L++R+CD+  MAKKR L + +S+F      QN  DNWNPK+W+
Sbjct: 1   MEEVGAQVASPIFIHQALSSRFCDAASMAKKRDLSYQTSNFQHHRFPQNPRDNWNPKAWD 60

Query: 92  WDSARFVAKPLQYDG--VQVGT 33
           WDS RFVAKPL  D   +Q+GT
Sbjct: 61  WDSVRFVAKPLDADTNVLQLGT 82


>emb|CBI40788.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
 Frame = -2

Query: 260 MEEAGAQVVAPVVMHQHLAARYCDSYPMAKKRALPFHSSSFLQ------QNTSDNWNPKS 99
           MEE GAQV  P+ +HQ L++R+ ++ PMAKKR LP+ SS+F        QN  DNWNPK 
Sbjct: 1   MEEVGAQVAPPIFIHQTLSSRFHEAVPMAKKRDLPYPSSNFQHQHPQRFQNPRDNWNPKV 60

Query: 98  WNWDSARFVAKPLQYDGVQVGT 33
           W+WDS RFVA PL+ + +++GT
Sbjct: 61  WDWDSVRFVANPLESELLRLGT 82


>ref|XP_002307005.1| predicted protein [Populus trichocarpa] gi|222856454|gb|EEE94001.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
 Frame = -2

Query: 260 MEEAGAQVVAPVVMHQHLAARYCDSYPMAKKRALPFHSSS-------FLQQNTSDNWNPK 102
           ME+ GAQV AP+ +HQ L++RYCD   MAKKR L +   +       FL+ +   NWN K
Sbjct: 1   MEKVGAQVAAPMFIHQALSSRYCDLASMAKKRDLSYQMPNFQLQQHHFLETSLEKNWNSK 60

Query: 101 SWNWDSARFVAKP 63
           +W+WDS  FVA+P
Sbjct: 61  AWDWDSVGFVARP 73


>ref|XP_002301891.1| predicted protein [Populus trichocarpa] gi|222843617|gb|EEE81164.1|
           predicted protein [Populus trichocarpa]
          Length = 1044

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 7/66 (10%)
 Frame = -2

Query: 260 MEEAGAQVVAPVVMHQHLAARYCDSYPMAKKRALPFHSSS-------FLQQNTSDNWNPK 102
           MEE GAQV AP+ +H+ L++RYCD   MAKK  L + S +       FLQ +   NWN K
Sbjct: 1   MEEVGAQVAAPIFIHEALSSRYCDMTSMAKKHDLSYQSPNSQLQQHQFLQASREKNWNSK 60

Query: 101 SWNWDS 84
           +W+WDS
Sbjct: 61  AWDWDS 66


Top