BLASTX nr result

ID: Scutellaria24_contig00025305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025305
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001294129.1| cytochrome b6/f complex subunit IV [Chlorant...   337   9e-91
ref|YP_007475992.1| cytochrome b6/f complex subunit IV [Bismarck...   334   6e-90
ref|YP_001718468.1| cytochrome b6/f complex subunit IV [Manihot ...   334   6e-90
ref|YP_007475906.1| cytochrome b6/f complex subunit IV [Calamus ...   334   7e-90
ref|YP_006073135.1| cytochrome b6/f complex subunit IV (chloropl...   333   1e-89

>ref|YP_001294129.1| cytochrome b6/f complex subunit IV [Chloranthus spicatus]
           gi|146744218|gb|ABQ43290.1| cytochrome b6/f complex
           subunit IV [Chloranthus spicatus]
          Length = 173

 Score =  337 bits (864), Expect = 9e-91
 Identities = 164/173 (94%), Positives = 167/173 (96%)
 Frame = -3

Query: 573 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 394
           MG+TKKPDL DPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
Sbjct: 1   MGITKKPDLTDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 60

Query: 393 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 214
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVP GLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPTGLLTVPFLENVNKF 120

Query: 213 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*FDSIVK*HDVCI 55
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF  DS +K HD+CI
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQIDSTMKYHDICI 173


>ref|YP_007475992.1| cytochrome b6/f complex subunit IV [Bismarckia nobilis]
           gi|449326474|gb|AGE93056.1| cytochrome b6/f complex
           subunit IV [Bismarckia nobilis]
          Length = 173

 Score =  334 bits (857), Expect = 6e-90
 Identities = 165/173 (95%), Positives = 166/173 (95%)
 Frame = -3

Query: 573 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 394
           MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGT+ACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTLACNVGLAVLEPS 60

Query: 393 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 214
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVP GLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPTGLLTVPFLENVNKF 120

Query: 213 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*FDSIVK*HDVCI 55
           QNPFRRPVATTVFLIGT VALWLGIGATLPIDKSLTLGLF  DS VK HDV I
Sbjct: 121 QNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQIDSTVKYHDVGI 173


>ref|YP_001718468.1| cytochrome b6/f complex subunit IV [Manihot esculenta]
           gi|225544154|ref|YP_002720143.1| petD [Jatropha curcas]
           gi|326909423|ref|YP_004327693.1| cytochrome b6/f complex
           subunit IV [Hevea brasiliensis]
           gi|157695916|gb|ABV66185.1| cytochrome b6/f complex
           subunit IV [Manihot esculenta]
           gi|224979595|gb|ACN72722.1| petD [Jatropha curcas]
           gi|290489368|gb|ADD31068.1| cytochrome b6/f complex
           subunit IV protein [Heuchera sanguinea]
           gi|290489370|gb|ADD31069.1| cytochrome b6/f complex
           subunit IV protein [Liquidambar styraciflua]
           gi|308523537|gb|ADO33587.1| cytochrome b6/f complex
           subunit IV [Hevea brasiliensis]
          Length = 167

 Score =  334 bits (857), Expect = 6e-90
 Identities = 165/167 (98%), Positives = 165/167 (98%)
 Frame = -3

Query: 573 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 394
           MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 60

Query: 393 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 214
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 120

Query: 213 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*FDSIVK 73
           QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF  DSIVK
Sbjct: 121 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLFQIDSIVK 167


>ref|YP_007475906.1| cytochrome b6/f complex subunit IV [Calamus caryotoides]
           gi|449326387|gb|AGE92970.1| cytochrome b6/f complex
           subunit IV [Calamus caryotoides]
          Length = 173

 Score =  334 bits (856), Expect = 7e-90
 Identities = 165/173 (95%), Positives = 166/173 (95%)
 Frame = -3

Query: 573 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 394
           MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGT+ACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTLACNVGLAVLEPS 60

Query: 393 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 214
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVP GLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPMGLLTVPFLENVNKF 120

Query: 213 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*FDSIVK*HDVCI 55
           QNPFRRPVATTVFLIGT VALWLGIGATLPIDKSLTLGLF  DS VK HDV I
Sbjct: 121 QNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQIDSTVKYHDVGI 173


>ref|YP_006073135.1| cytochrome b6/f complex subunit IV (chloroplast) [Elaeis
           guineensis] gi|325305738|gb|ADZ10899.1| cytochrome b6/f
           complex subunit IV (chloroplast) [Elaeis guineensis]
          Length = 173

 Score =  333 bits (855), Expect = 1e-89
 Identities = 164/173 (94%), Positives = 166/173 (95%)
 Frame = -3

Query: 573 MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPS 394
           MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGT+ACNVGLAVLEPS
Sbjct: 1   MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTLACNVGLAVLEPS 60

Query: 393 MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKF 214
           MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVP GLLTVPFLENVNKF
Sbjct: 61  MIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPMGLLTVPFLENVNKF 120

Query: 213 QNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*FDSIVK*HDVCI 55
           QNPFRRPVATTVFLIGT VALWLGIGATLPIDKSLTLGLF  DS VK HD+ I
Sbjct: 121 QNPFRRPVATTVFLIGTVVALWLGIGATLPIDKSLTLGLFQIDSTVKYHDIGI 173


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