BLASTX nr result
ID: Scutellaria24_contig00025261
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Scutellaria24_contig00025261 (243 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527838.1| helicase, putative [Ricinus communis] gi|223... 64 1e-08 emb|CBI24348.3| unnamed protein product [Vitis vinifera] 63 3e-08 ref|XP_002273102.1| PREDICTED: superkiller viralicidic activity ... 63 3e-08 ref|XP_002328732.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 ref|NP_176185.1| RNA helicase [Arabidopsis thaliana] gi|5080810|... 59 5e-07 >ref|XP_002527838.1| helicase, putative [Ricinus communis] gi|223532762|gb|EEF34541.1| helicase, putative [Ricinus communis] Length = 991 Score = 63.9 bits (154), Expect = 1e-08 Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 6/69 (8%) Frame = +1 Query: 43 MGSVKRKQLEEAKEDYEAPPLKQQRENELMM-DEPVACLHDVSYPEGYV-----SRGIRQ 204 M +KRK +E + PP KQQREN + DEPVACLHDVSYPE YV +++ Sbjct: 1 MALLKRKSVEYPSGE-SLPPQKQQRENGMATADEPVACLHDVSYPENYVPPPRLDSSVQK 59 Query: 205 SSKPAKEFP 231 KPAKEFP Sbjct: 60 DLKPAKEFP 68 >emb|CBI24348.3| unnamed protein product [Vitis vinifera] Length = 968 Score = 62.8 bits (151), Expect = 3e-08 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 8/71 (11%) Frame = +1 Query: 43 MGSVKRKQLEEAKEDYEAPPLKQQRENELMM---DEPVACLHDVSYPEGYVSRGI----- 198 MGS+KRK E+ + P KQQRE+ + +E VAC+HDVSYPEGY R Sbjct: 1 MGSLKRKSTEDPSVE-RLSPQKQQREDSASLNTLEESVACIHDVSYPEGYEPRSSFSSSP 59 Query: 199 RQSSKPAKEFP 231 R+ SKPAKEFP Sbjct: 60 RKDSKPAKEFP 70 >ref|XP_002273102.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Vitis vinifera] Length = 994 Score = 62.8 bits (151), Expect = 3e-08 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 8/71 (11%) Frame = +1 Query: 43 MGSVKRKQLEEAKEDYEAPPLKQQRENELMM---DEPVACLHDVSYPEGYVSRGI----- 198 MGS+KRK E+ + P KQQRE+ + +E VAC+HDVSYPEGY R Sbjct: 1 MGSLKRKSTEDPSVE-RLSPQKQQREDSASLNTLEESVACIHDVSYPEGYEPRSSFSSSP 59 Query: 199 RQSSKPAKEFP 231 R+ SKPAKEFP Sbjct: 60 RKDSKPAKEFP 70 >ref|XP_002328732.1| predicted protein [Populus trichocarpa] gi|222839030|gb|EEE77381.1| predicted protein [Populus trichocarpa] Length = 1012 Score = 59.3 bits (142), Expect = 3e-07 Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 17/80 (21%) Frame = +1 Query: 43 MGSVKRKQLEEAKEDYEA-PPLKQQRENE----------LMMDEPVACLHDVSYPEGYVS 189 M SVKRK +E +ED PP KQ RE+ + E VACLHDVSYPE YV Sbjct: 1 MASVKRKSIESQQEDRPLLPPQKQLREDHSNNNSSSSKIIGHGEAVACLHDVSYPENYVR 60 Query: 190 RG------IRQSSKPAKEFP 231 I++ SKPAKEFP Sbjct: 61 PSSSSVTQIQKDSKPAKEFP 80 >ref|NP_176185.1| RNA helicase [Arabidopsis thaliana] gi|5080810|gb|AAD39319.1|AC007258_8 Very similar to helicases [Arabidopsis thaliana] gi|51971869|dbj|BAD44599.1| hypothetical protein [Arabidopsis thaliana] gi|332195495|gb|AEE33616.1| RNA helicase [Arabidopsis thaliana] Length = 988 Score = 58.5 bits (140), Expect = 5e-07 Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 4/67 (5%) Frame = +1 Query: 43 MGSVKRKQLEEAKEDYEAPPLKQQRENE---LMMDEPVACLHDVSYPEGYVSRGIRQSSK 213 MGSVKRK +EE+ + APP K QRE++ ++ +E V C+HDVS+PE YV +K Sbjct: 1 MGSVKRKSVEESSDS--APPQKVQREDDSTQIINEELVGCVHDVSFPENYVPLAPSVHNK 58 Query: 214 -PAKEFP 231 PAK+FP Sbjct: 59 PPAKDFP 65