BLASTX nr result

ID: Scutellaria24_contig00025260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025260
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]           191   7e-47
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   191   7e-47
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]     189   2e-46
gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sat...   189   2e-46
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   187   6e-46

>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score =  191 bits (484), Expect = 7e-47
 Identities = 88/138 (63%), Positives = 115/138 (83%)
 Frame = -2

Query: 415  EDGIFISQKKYTESLLKRFKMEGCKTVATPLDSSKALQKDDGSPKADISKFRSLIGSLLY 236
            ++GIFISQ+KY E++LK+FKM+ CK+V TPL  ++  +  DG+ KAD + +RSL+GSLLY
Sbjct: 1063 DEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLY 1122

Query: 235  LTATRPDIMYAMSFLSRFMQDPSQIHYGAAKRVLRYLQGTKNFGIWYESTSDSKLFGYTD 56
            LTATRPDIM+A S LSR+M  PSQ+++ AAKRVLRY++GT ++GIWY+   +SKL GYTD
Sbjct: 1123 LTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTD 1182

Query: 55   SDWAGSVDDMKSTSGYAF 2
            SDWAG +DDMKSTSGYAF
Sbjct: 1183 SDWAGCLDDMKSTSGYAF 1200


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  191 bits (484), Expect = 7e-47
 Identities = 88/138 (63%), Positives = 115/138 (83%)
 Frame = -2

Query: 415  EDGIFISQKKYTESLLKRFKMEGCKTVATPLDSSKALQKDDGSPKADISKFRSLIGSLLY 236
            ++GIFISQ+KY E++LK+FKM+ CK+V TPL  ++  +  DG+ KAD + +RSL+GSLLY
Sbjct: 1084 DEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLY 1143

Query: 235  LTATRPDIMYAMSFLSRFMQDPSQIHYGAAKRVLRYLQGTKNFGIWYESTSDSKLFGYTD 56
            LTATRPDIM+A S LSR+M  PSQ+++ AAKRVLRY++GT ++GIWY+   +SKL GYTD
Sbjct: 1144 LTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTD 1203

Query: 55   SDWAGSVDDMKSTSGYAF 2
            SDWAG +DDMKSTSGYAF
Sbjct: 1204 SDWAGCLDDMKSTSGYAF 1221


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score =  189 bits (481), Expect = 2e-46
 Identities = 88/138 (63%), Positives = 114/138 (82%)
 Frame = -2

Query: 415  EDGIFISQKKYTESLLKRFKMEGCKTVATPLDSSKALQKDDGSPKADISKFRSLIGSLLY 236
            ++GIFISQ+KY E++LK+FKM+ CK+V TPL  ++  +  DG+ KAD + +RSL+GSLLY
Sbjct: 868  DEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLY 927

Query: 235  LTATRPDIMYAMSFLSRFMQDPSQIHYGAAKRVLRYLQGTKNFGIWYESTSDSKLFGYTD 56
            LTATRPDIM+A S LSR+M  PSQ+++ AAKRVLRY++GT  +GIWY+   +SKL GYTD
Sbjct: 928  LTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTAYYGIWYKPVKESKLIGYTD 987

Query: 55   SDWAGSVDDMKSTSGYAF 2
            SDWAG +DDMKSTSGYAF
Sbjct: 988  SDWAGCLDDMKSTSGYAF 1005


>gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108708461|gb|ABF96256.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1167

 Score =  189 bits (480), Expect = 2e-46
 Identities = 87/138 (63%), Positives = 114/138 (82%)
 Frame = -2

Query: 415  EDGIFISQKKYTESLLKRFKMEGCKTVATPLDSSKALQKDDGSPKADISKFRSLIGSLLY 236
            ++GIFISQ+KY E++LK+FKM+ CK+V TPL  ++  +  DG+ K D + +RSL+GSLLY
Sbjct: 916  DEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKVDPTIYRSLVGSLLY 975

Query: 235  LTATRPDIMYAMSFLSRFMQDPSQIHYGAAKRVLRYLQGTKNFGIWYESTSDSKLFGYTD 56
            LTATRPDIM+A S LSR+M  PSQ+++ AAKRVLRY++GT ++GIWY+   +SKL GYTD
Sbjct: 976  LTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTD 1035

Query: 55   SDWAGSVDDMKSTSGYAF 2
            SDWAG +DDMKSTSGYAF
Sbjct: 1036 SDWAGCLDDMKSTSGYAF 1053


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  187 bits (476), Expect = 6e-46
 Identities = 86/138 (62%), Positives = 113/138 (81%)
 Frame = -2

Query: 415  EDGIFISQKKYTESLLKRFKMEGCKTVATPLDSSKALQKDDGSPKADISKFRSLIGSLLY 236
            ++GIFISQ+KY E++LK+FKM+ CK+V TPL  ++  +  DG+ K D + +RSL+GSLLY
Sbjct: 874  DEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKVDPTIYRSLVGSLLY 933

Query: 235  LTATRPDIMYAMSFLSRFMQDPSQIHYGAAKRVLRYLQGTKNFGIWYESTSDSKLFGYTD 56
            LTATRPDIM+A S LSR+M  PSQ+++ AAKRVLRY++GT ++GIWY+   +SKL GYTD
Sbjct: 934  LTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTD 993

Query: 55   SDWAGSVDDMKSTSGYAF 2
            SDWAG +DDMK TSGYAF
Sbjct: 994  SDWAGCLDDMKGTSGYAF 1011


Top