BLASTX nr result

ID: Scutellaria24_contig00025234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025234
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   108   3e-22
ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   108   6e-22
sp|P46942.1|DB10_NICSY RecName: Full=ATP-dependent RNA helicase-...   107   1e-21
ref|XP_003554808.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   107   1e-21
ref|XP_003524550.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   107   1e-21

>ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cucumis
           sativus]
          Length = 778

 Score =  108 bits (271), Expect = 3e-22
 Identities = 65/129 (50%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
 Frame = +1

Query: 1   SLGHRSELDDEKKYDQDSNGSSAKIPSAFQASQATESRRDSQNDPSVTTNTGHGPNASKG 180
           S GH    +  +  D+   GS A  P    A   T    D+ N    T NTGHG    KG
Sbjct: 74  SSGHSYNNNLNENNDKYGRGSHA--PKQEVARGETFQSHDTSNG---TPNTGHGGAPLKG 128

Query: 181 -----AETGLSGEKYCLHHEITVTGGNVPQPFTTFQATGFPSEILREMQQAGFSAPTPIQ 345
                A  G+S E Y   HEIT +G NVP PF++F+ATGFP EILRE+  AGFSAPTPIQ
Sbjct: 129 HRPSDAGNGISAESYRQRHEITFSGDNVPAPFSSFEATGFPPEILREVHNAGFSAPTPIQ 188

Query: 346 AQSWPIALQ 372
           AQSWPIALQ
Sbjct: 189 AQSWPIALQ 197


>ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           46-like [Cucumis sativus]
          Length = 785

 Score =  108 bits (269), Expect = 6e-22
 Identities = 59/121 (48%), Positives = 75/121 (61%), Gaps = 5/121 (4%)
 Frame = +1

Query: 25  DDEKKYDQDSNGSSAKIPSAFQASQATESRRDSQNDPSVTTNTGHGPNASKG-----AET 189
           ++  KY + S+    ++    Q     E+ + S +  + T NTGHG    KG     A  
Sbjct: 85  ENNDKYGRGSHAPKQEVEXKIQIVARGETFQ-SHDTSNGTPNTGHGGAPLKGHRPSDAGN 143

Query: 190 GLSGEKYCLHHEITVTGGNVPQPFTTFQATGFPSEILREMQQAGFSAPTPIQAQSWPIAL 369
           G+S E Y   HEIT +G NVP PF++F+ATGFP EILRE+  AGFSAPTPIQAQSWPIAL
Sbjct: 144 GISAESYRQRHEITFSGDNVPAPFSSFEATGFPPEILREVHNAGFSAPTPIQAQSWPIAL 203

Query: 370 Q 372
           Q
Sbjct: 204 Q 204


>sp|P46942.1|DB10_NICSY RecName: Full=ATP-dependent RNA helicase-like protein DB10
           gi|563986|dbj|BAA03763.1| RNA helicase like protein DB10
           [Nicotiana sylvestris]
          Length = 607

 Score =  107 bits (267), Expect = 1e-21
 Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 3/117 (2%)
 Frame = +1

Query: 34  KKYDQD---SNGSSAKIPSAFQASQATESRRDSQNDPSVTTNTGHGPNASKGAETGLSGE 204
           ++YD D   + GS+ KI           S  D  +D   + + G+G   S G  + +S E
Sbjct: 79  QRYDADGGHNRGSNNKI---------ARSSSDRFHD-GTSVHEGYG---SLGVGSDISQE 125

Query: 205 KYCLHHEITVTGGNVPQPFTTFQATGFPSEILREMQQAGFSAPTPIQAQSWPIALQG 375
            YC  +EI+VTGG+VP P T+F+ATGFPSEI+REM QAGFSAPTPIQAQSWPIALQG
Sbjct: 126 SYCRRNEISVTGGDVPAPLTSFEATGFPSEIVREMHQAGFSAPTPIQAQSWPIALQG 182


>ref|XP_003554808.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           46-like [Glycine max]
          Length = 741

 Score =  107 bits (267), Expect = 1e-21
 Identities = 61/123 (49%), Positives = 80/123 (65%), Gaps = 6/123 (4%)
 Frame = +1

Query: 25  DDEKKYDQDSNGSSAKIPSAFQASQATESRRDSQNDPSVTTNT-GHGPNASKG-----AE 186
           D   +YD++  G S    S  + +Q+++    + +D S  TN  G+G ++ +G     A 
Sbjct: 85  DFSDRYDRNGTGGSNDAGS--RNNQSSKGGSYTSHDVSNGTNVAGNGNSSVRGHGASDAG 142

Query: 187 TGLSGEKYCLHHEITVTGGNVPQPFTTFQATGFPSEILREMQQAGFSAPTPIQAQSWPIA 366
            GLS E Y   HEI+VTG NVP P  +F +TGFPSE+LRE+Q AGFSAPTPIQAQSWPIA
Sbjct: 143 AGLSAESYRHRHEISVTGDNVPPPLASFGSTGFPSELLREVQNAGFSAPTPIQAQSWPIA 202

Query: 367 LQG 375
           LQG
Sbjct: 203 LQG 205


>ref|XP_003524550.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Glycine
           max]
          Length = 774

 Score =  107 bits (267), Expect = 1e-21
 Identities = 63/130 (48%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
 Frame = +1

Query: 7   GHRSELDDEKKYDQDSNGSSAKIPSAFQASQ--ATESRRDSQNDPSVTTNT-----GHGP 165
           GH  +  D  +YD++ +G S +  S    S    + +  D  N   V  N      GHG 
Sbjct: 81  GHSPDFSD--RYDRNGSGGSNEAGSRNNQSSKGGSYASHDVSNGTHVAGNVDSSVRGHG- 137

Query: 166 NASKGAETGLSGEKYCLHHEITVTGGNVPQPFTTFQATGFPSEILREMQQAGFSAPTPIQ 345
             +  A  GLS E Y   HEI+VTG NVP P  +F +TGFPSE+LRE+Q AGFSAPTPIQ
Sbjct: 138 --ASDAGAGLSPESYRHRHEISVTGDNVPPPLASFGSTGFPSELLREVQNAGFSAPTPIQ 195

Query: 346 AQSWPIALQG 375
           AQSWPIALQG
Sbjct: 196 AQSWPIALQG 205


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