BLASTX nr result

ID: Scutellaria24_contig00025231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025231
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539691.1| PREDICTED: probable histone H2B.1-like isofo...    74   1e-11
ref|XP_003539693.1| PREDICTED: probable histone H2B.1-like [Glyc...    74   1e-11
gb|ACG41998.1| histone H2B.1 [Zea mays]                                74   2e-11
ref|NP_001131457.1| uncharacterized protein LOC100192792 [Zea ma...    74   2e-11
ref|XP_003564232.1| PREDICTED: histone H2B.3-like isoform 1 [Bra...    73   2e-11

>ref|XP_003539691.1| PREDICTED: probable histone H2B.1-like isoform 1 [Glycine max]
           gi|356542475|ref|XP_003539692.1| PREDICTED: probable
           histone H2B.1-like isoform 2 [Glycine max]
          Length = 149

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/47 (78%), Positives = 37/47 (78%)
 Frame = +1

Query: 127 GEGXXXXXXXXXSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFIN 267
           GEG         S ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFIN
Sbjct: 46  GEGGKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFIN 92


>ref|XP_003539693.1| PREDICTED: probable histone H2B.1-like [Glycine max]
           gi|356542483|ref|XP_003539696.1| PREDICTED: probable
           histone H2B.1-like [Glycine max]
          Length = 149

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/47 (78%), Positives = 37/47 (78%)
 Frame = +1

Query: 127 GEGXXXXXXXXXSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFIN 267
           GEG         S ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFIN
Sbjct: 46  GEGGKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFIN 92


>gb|ACG41998.1| histone H2B.1 [Zea mays]
          Length = 117

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/50 (76%), Positives = 38/50 (76%)
 Frame = +1

Query: 118 SVAGEGXXXXXXXXXSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFIN 267
           S AGEG         S ETYKIYIFKVLKQVHPDIGISSKAM IMNSFIN
Sbjct: 44  SGAGEGKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIN 93


>ref|NP_001131457.1| uncharacterized protein LOC100192792 [Zea mays]
           gi|194691574|gb|ACF79871.1| unknown [Zea mays]
           gi|195640144|gb|ACG39540.1| histone H2B.1 [Zea mays]
           gi|413950452|gb|AFW83101.1| histone H2B isoform 1 [Zea
           mays] gi|413950453|gb|AFW83102.1| histone H2B isoform 2
           [Zea mays]
          Length = 150

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/50 (76%), Positives = 38/50 (76%)
 Frame = +1

Query: 118 SVAGEGXXXXXXXXXSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFIN 267
           S AGEG         S ETYKIYIFKVLKQVHPDIGISSKAM IMNSFIN
Sbjct: 44  SGAGEGKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIN 93


>ref|XP_003564232.1| PREDICTED: histone H2B.3-like isoform 1 [Brachypodium distachyon]
           gi|357125100|ref|XP_003564233.1| PREDICTED: histone
           H2B.3-like isoform 2 [Brachypodium distachyon]
           gi|357125102|ref|XP_003564234.1| PREDICTED: histone
           H2B.3-like isoform 3 [Brachypodium distachyon]
           gi|357125104|ref|XP_003564235.1| PREDICTED: histone
           H2B.3-like isoform 4 [Brachypodium distachyon]
          Length = 155

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/48 (77%), Positives = 37/48 (77%)
 Frame = +1

Query: 124 AGEGXXXXXXXXXSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFIN 267
           AGEG         S ETYKIYIFKVLKQVHPDIGISSKAM IMNSFIN
Sbjct: 51  AGEGKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFIN 98


Top