BLASTX nr result

ID: Scutellaria24_contig00025038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00025038
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD77411.1| geranylgeranyl diphosphate synthase [Zingiber off...    67   4e-21
dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasi...    63   6e-21
dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton su...    63   6e-21
ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synt...    65   6e-21
ref|XP_003518048.1| PREDICTED: geranylgeranyl pyrophosphate synt...    65   6e-21

>gb|ABD77411.1| geranylgeranyl diphosphate synthase [Zingiber officinale]
          Length = 112

 Score = 67.0 bits (162), Expect(2) = 4e-21
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = -3

Query: 444 IDRLRKYSRSAGLLFQVVDDILDVTKSSEELGKTAG 337
           I+RLRKY+RS GLLFQVVDDILDVTKSSEELGKTAG
Sbjct: 20  IERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAG 55



 Score = 59.3 bits (142), Expect(2) = 4e-21
 Identities = 28/62 (45%), Positives = 37/62 (59%)
 Frame = -1

Query: 257 GKTAGKDKVAGKATYPAVVGMEKSXXXXXXXXXXXXXXXLGFDPIRAAPFIALLNFIAYR 78
           GKTAGKD  + K TYP ++G+++S                GFDPI+AAP + L N+IAYR
Sbjct: 51  GKTAGKDLASDKTTYPKLLGLDESKEFAVKLLKAATEQLAGFDPIKAAPLLHLANYIAYR 110

Query: 77  DK 72
            K
Sbjct: 111 QK 112


>dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 370

 Score = 62.8 bits (151), Expect(2) = 6e-21
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = -3

Query: 444 IDRLRKYSRSAGLLFQVVDDILDVTKSSEELGKTAG 337
           +++LRKY+R  GLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 278 VEKLRKYARGIGLLFQVVDDILDVTKSSQELGKTAG 313



 Score = 62.8 bits (151), Expect(2) = 6e-21
 Identities = 32/60 (53%), Positives = 37/60 (61%)
 Frame = -1

Query: 257 GKTAGKDKVAGKATYPAVVGMEKSXXXXXXXXXXXXXXXLGFDPIRAAPFIALLNFIAYR 78
           GKTAGKD VA K TYP ++G+EKS                GFDP +AAP IAL N+IAYR
Sbjct: 309 GKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAYR 368


>dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
          Length = 368

 Score = 62.8 bits (151), Expect(2) = 6e-21
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = -3

Query: 444 IDRLRKYSRSAGLLFQVVDDILDVTKSSEELGKTAG 337
           +++LRKY+R  GLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 276 VEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAG 311



 Score = 62.8 bits (151), Expect(2) = 6e-21
 Identities = 32/60 (53%), Positives = 37/60 (61%)
 Frame = -1

Query: 257 GKTAGKDKVAGKATYPAVVGMEKSXXXXXXXXXXXXXXXLGFDPIRAAPFIALLNFIAYR 78
           GKTAGKD VA K TYP ++G+EKS                GFDP +AAP IAL N+IAYR
Sbjct: 307 GKTAGKDLVADKVTYPKLMGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAYR 366


>ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 367

 Score = 65.1 bits (157), Expect(2) = 6e-21
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = -1

Query: 257 GKTAGKDKVAGKATYPAVVGMEKSXXXXXXXXXXXXXXXLGFDPIRAAPFIALLNFIAYR 78
           GKTAGKD VA K TYP ++G+EKS               +GFDP++AAP IAL N+IAYR
Sbjct: 306 GKTAGKDLVADKVTYPKLLGIEKSKVFAAKLNKDAQDQLVGFDPVKAAPLIALANYIAYR 365



 Score = 60.5 bits (145), Expect(2) = 6e-21
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = -3

Query: 444 IDRLRKYSRSAGLLFQVVDDILDVTKSSEELGKTAG 337
           +++LRK++R  GLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 275 VEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAG 310


>ref|XP_003518048.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 350

 Score = 65.1 bits (157), Expect(2) = 6e-21
 Identities = 32/60 (53%), Positives = 38/60 (63%)
 Frame = -1

Query: 257 GKTAGKDKVAGKATYPAVVGMEKSXXXXXXXXXXXXXXXLGFDPIRAAPFIALLNFIAYR 78
           GKTAGKD VA K TYP ++G+EKS                GFDP++AAP IAL N+IAYR
Sbjct: 289 GKTAGKDLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLAGFDPVKAAPLIALANYIAYR 348



 Score = 60.5 bits (145), Expect(2) = 6e-21
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = -3

Query: 444 IDRLRKYSRSAGLLFQVVDDILDVTKSSEELGKTAG 337
           +++LRK++R  GLLFQVVDDILDVTKSS+ELGKTAG
Sbjct: 258 VEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAG 293


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