BLASTX nr result

ID: Scutellaria24_contig00024946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024946
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    67   1e-09
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    60   2e-07
gb|AAO23078.1| polyprotein [Glycine max]                               56   3e-06
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    56   3e-06

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1    LKPAVGAAAISPVLPDDLLAVDPPFI--PSMVLERRSVVRDGVTVDQVLIQWLGLGVEES 174
            LK AVG       LPD  L  D   +  P  VL RR++   G  +DQVL+ W+G  VEE+
Sbjct: 1181 LKKAVGNYHEEENLPD--LEEDKGVVIEPETVLTRRTIQVQGEKIDQVLVHWMGQKVEEA 1238

Query: 175  SWVDVADMRGQFPTFSLEDKAVQSPGAI 258
            +W D   +R QFP F LEDKA+ S G+I
Sbjct: 1239 TWEDTLIIRSQFPNFYLEDKAMLSGGSI 1266


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1    LKPAVGAAAISPVLPDDLLAVDP--PFIPSMVLERRSVVRDGVTVDQVLIQWLGLGVEES 174
            L+ AVG A + PVLP  LL  D   P  PS VL  R    +     ++L+QW  +  +E+
Sbjct: 1284 LRKAVGTAPVFPVLPP-LLTTDLVLPSSPSQVLGIRPNPLNQAAPAEILVQWSDMSADEA 1342

Query: 175  SWVDVADMRGQFPTFSLEDKAVQSPGAI 258
            +W +V D+  +FPTF LEDK +   G I
Sbjct: 1343 TWENVQDIHERFPTFHLEDKVLNWAGGI 1370


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
 Frame = +1

Query: 1    LKPAVGAAAISPVLPDDLLAVD--PPFIPSMVLERRSVVRDGVTVDQVLIQWLGLGVEES 174
            LKP  G A   P LP  L   +  P   P  +L  R ++R    ++Q+L+QW     +E+
Sbjct: 1416 LKPFNGTAQ-DPYLPLPLTVTEMGPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEA 1474

Query: 175  SWVDVADMRGQFPTFSLEDKAV 240
            +W D+ D++  +PTF+LEDK V
Sbjct: 1475 TWEDIEDIKASYPTFNLEDKVV 1496


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
 Frame = +1

Query: 1    LKPAVGAAAISPVLPDDL---LAVDPPFIPSMVLERRSVVRDGVTVDQVLIQWLGLGVEE 171
            LK AVG+   SP +P  L   L +D    P  +L  RS  +    V +VLI+WL L   E
Sbjct: 1448 LKKAVGSLQSSPTIPPQLTNDLVLDAQ--PESLLNIRSHPQKPAEVTEVLIKWLNLPAFE 1505

Query: 172  SSWVDVADMRGQFPTFSLEDKAVQSPGAI 258
            ++W D A    +FP F LEDK +   G+I
Sbjct: 1506 ATWEDAALFNARFPDFHLEDKVLNWEGSI 1534


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