BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024942
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16226.3| unnamed protein product [Vitis vinifera]              373   e-101
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   373   e-101
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu...   371   e-100
gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]   369   e-100
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   369   e-100

>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  373 bits (958), Expect = e-101
 Identities = 188/286 (65%), Positives = 217/286 (75%)
 Frame = +2

Query: 2    GDALNMEKKVTIDKEYGQCTDYIKSYTSGSLDLLPGCNKAETLEAKITGTLNNIRETTAN 181
            G  LN +K   I++ Y  C + I+ Y  G L L PGCN A+TLEA+ITG LN IRETTAN
Sbjct: 703  GGLLNDQKSKRIEEGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTAN 762

Query: 182  VCMKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFVDRTLPHFERGA 361
            VCM+ L+WRNSPLIMSQCGSKGSPINI QMIACVGQQSVGGRRAP+GF+DRTLPHF R +
Sbjct: 763  VCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKS 822

Query: 362  KDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVY 541
            K PDAKGFV +SFYTGL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLS+ 
Sbjct: 823  KTPDAKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQ 882

Query: 542  YDHTVRNASACIVQFMYGGDGMDPGQMEEKSGLPLNFERLFMKAKATCPAMGQKSLTIEE 721
            YD TVRNA+  IVQF+YG DGMDP +ME K G PLNF RLF+K KATCPA    SL+  +
Sbjct: 883  YDETVRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQ 942

Query: 722  IKKIVDGVIETRLLKSTTTPEVSCSQSFPSSDAQSKEGCLLAFANS 859
            I++ V      + LK   T    CS +F ++ +   E C   F N+
Sbjct: 943  IEETV------KRLKEHNTSAEGCSDAFKTNLSGFLEECKEKFKNT 982


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  373 bits (958), Expect = e-101
 Identities = 188/286 (65%), Positives = 217/286 (75%)
 Frame = +2

Query: 2    GDALNMEKKVTIDKEYGQCTDYIKSYTSGSLDLLPGCNKAETLEAKITGTLNNIRETTAN 181
            G  LN +K   I++ Y  C + I+ Y  G L L PGCN A+TLEA+ITG LN IRETTAN
Sbjct: 703  GGLLNDQKSKRIEEGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTAN 762

Query: 182  VCMKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFVDRTLPHFERGA 361
            VCM+ L+WRNSPLIMSQCGSKGSPINI QMIACVGQQSVGGRRAP+GF+DRTLPHF R +
Sbjct: 763  VCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKS 822

Query: 362  KDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVY 541
            K PDAKGFV +SFYTGL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLS+ 
Sbjct: 823  KTPDAKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQ 882

Query: 542  YDHTVRNASACIVQFMYGGDGMDPGQMEEKSGLPLNFERLFMKAKATCPAMGQKSLTIEE 721
            YD TVRNA+  IVQF+YG DGMDP +ME K G PLNF RLF+K KATCPA    SL+  +
Sbjct: 883  YDETVRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQ 942

Query: 722  IKKIVDGVIETRLLKSTTTPEVSCSQSFPSSDAQSKEGCLLAFANS 859
            I++ V      + LK   T    CS +F ++ +   E C   F N+
Sbjct: 943  IEETV------KRLKEHNTSAEGCSDAFKTNLSGFLEECKEKFKNT 982


>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
          Length = 546

 Score =  371 bits (952), Expect = e-100
 Identities = 188/289 (65%), Positives = 216/289 (74%), Gaps = 1/289 (0%)
 Frame = +2

Query: 2    GDALNMEKKVTIDKEYGQCTDYIKSYTSGSLDLLPGCNKAETLEAKITGTLNNIRETTAN 181
            G+ LN  KK+ I+K Y +C D I  Y +G L LLPGCN A+TLE+ ITG LN+IRE  A 
Sbjct: 199  GEHLNRNKKLEIEKGYKECDDLINRYNTGGLKLLPGCNAAQTLESNITGKLNDIREAAAK 258

Query: 182  VCMKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFVDRTLPHFERGA 361
            VCM +L+WRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNGF+DR+LPHF   +
Sbjct: 259  VCMASLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPINS 318

Query: 362  KDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVY 541
            K P AKGFV NSFYTGL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLMK+LEDLS Y
Sbjct: 319  KTPSAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSTY 378

Query: 542  YDHTVRNASACIVQFMYGGDGMDPGQMEEKSGLPLNFERLFMKAKATCPA-MGQKSLTIE 718
            YD TVRN+S  IVQ +YG DGMDP  ME K G+PLN +RLFMK KAT PA     SL+  
Sbjct: 379  YDETVRNSSGGIVQLLYGDDGMDPANMEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPS 438

Query: 719  EIKKIVDGVIETRLLKSTTTPEVSCSQSFPSSDAQSKEGCLLAFANSLR 865
            EI K  D     RL K   TPE  CS +F  S +   + C++A   + R
Sbjct: 439  EILKAAD----DRLSKHDMTPEGGCSAAFKESLSDFLKKCVVALRKTRR 483


>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
          Length = 554

 Score =  369 bits (947), Expect = e-100
 Identities = 190/300 (63%), Positives = 225/300 (75%), Gaps = 11/300 (3%)
 Frame = +2

Query: 2    GDALNMEKKVTIDKEYGQCTDYIKSYTSGSLDLLPGCNKAETLEAKITGTLNNIRETTAN 181
            G +L+ +K+  IDK   +C   I+ Y +G L+L PGC+ A+TLEA+ITG  NNIRE  A 
Sbjct: 197  GKSLSDKKQKKIDKGKEKCDKLIEHYKTGKLELQPGCDAAQTLEAEITGIQNNIREKAAT 256

Query: 182  VCMKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFVDRTLPHFERGA 361
            VCM+NL+WRNSPLIMSQCGSKGSP NI QMIACVGQQSVGGRRA NGF+DR+LPHF R +
Sbjct: 257  VCMENLHWRNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNS 316

Query: 362  KDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVY 541
              PDAKGFV+NSFYTGL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLS++
Sbjct: 317  VTPDAKGFVENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIH 376

Query: 542  YDHTVRNASACIVQFMYGGDGMDPGQMEEKSGLPLNFERLFMKAKATCPAMGQKSLTIEE 721
            YD TVR+AS  +VQF+YG DGMDP +ME K G PLN +RL+MK KATCPA G  SL+  E
Sbjct: 377  YDSTVRSASGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHSSLSPAE 436

Query: 722  IKKIVDGVIETRLLKSTTTPEVSCSQSFPSS------DAQSKEG-----CLLAFANSLRN 868
            I K+V      RL K   TPE  CS +F  S        Q+KEG     C+ +  N+ R+
Sbjct: 437  ILKLV----VARLSKHDMTPEGGCSDAFKKSLLDEEGFMQNKEGGFLGKCITSLKNTRRD 492


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  369 bits (946), Expect = e-100
 Identities = 190/292 (65%), Positives = 220/292 (75%), Gaps = 10/292 (3%)
 Frame = +2

Query: 2    GDALNMEKKVTIDKEYGQCTDYIKSYTSGSLDLLPGCNKAETLEAKITGTLNNIRETTAN 181
            GD L  +K+ TI + Y  C   I  + +G+L    GC+ A++LE+KIT  LN IRE TAN
Sbjct: 703  GDQLVKKKQTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATAN 762

Query: 182  VCMKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFVDRTLPHFERGA 361
            VCM+NL+WRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAP+GF+DR+LPHF R A
Sbjct: 763  VCMQNLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKA 822

Query: 362  KDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVY 541
            K P AKGFV NSFY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLS++
Sbjct: 823  KTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIH 882

Query: 542  YDHTVRNASACIVQFMYGGDGMDPGQMEEKSGLPLNFERLFMKAKATCPAMGQKSLTIEE 721
            YD +VRNA  CIVQF YG DGMDP QME KSG PLNFERLF+KAKATCP+ G K L+  E
Sbjct: 883  YDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSE 942

Query: 722  IKKIVDGVIETRLLKSTTTPEVSCSQSFPSS---------DAQSKE-GCLLA 847
              +     +E RL K   +PE  CS +F  S         +AQ K  G LLA
Sbjct: 943  FSE----TVEDRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLA 990