BLASTX nr result

ID: Scutellaria24_contig00024880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024880
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520009.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002328985.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06
ref|XP_002331774.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002520009.1| conserved hypothetical protein [Ricinus communis]
           gi|223540773|gb|EEF42333.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 737

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 22/147 (14%)
 Frame = +2

Query: 8   STRRRNVAKEPETEKPSARAPHTARRTVA----------KNAEETPAVVPQSNTRKGAIA 157
           STRR+ +  EPE+ +   R   T ++T A          +N  ETPAV   ++ R+   A
Sbjct: 72  STRRKPINVEPESSQLPTRTRRTTKKTSAAEEAEQENNNENLLETPAV--STSRRRVTAA 129

Query: 158 SAYRKMDSELKECME-------EEKKDVLVTPAPSNLASR-----RRRGAKEESVVKPPV 301
           SA RK+D++L E +E       EEK DV  TPA  +  S+      ++  +E+SV +  V
Sbjct: 130 SARRKIDTQLMESVEDEKAAVGEEKSDVPETPAIRSSRSKAPVVSTKKKIEEKSVQR--V 187

Query: 302 YSTRRSVRLAKKNVELLDENTDLSKKD 382
           Y TR SVRL +K++       DLS K+
Sbjct: 188 YGTRHSVRLLEKSL------ADLSVKE 208


>ref|XP_002328985.1| predicted protein [Populus trichocarpa] gi|222839219|gb|EEE77570.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 50/130 (38%), Positives = 74/130 (56%), Gaps = 18/130 (13%)
 Frame = +2

Query: 8   STRRRNVAKEPET-EKPSARAPHTARRTVA--------KNAE--ETPAVVPQSNTRKGAI 154
           STR + +  EPE+ +KP  R P T RR +         KNA   ETPA+ P S  R  A 
Sbjct: 74  STRNKPLRIEPESSQKPLTRTPCTTRRRIIGGDGDQENKNANHPETPAM-PTSRNRTSA- 131

Query: 155 ASAYRKMDSELKECMEEEKKDVLVTPAPSN-------LASRRRRGAKEESVVKPPVYSTR 313
            SA RKM  E+ E  +++K +V  TPA ++       +++RR+  A++E V    VYSTR
Sbjct: 132 TSARRKM-VEIAE--DQQKNNVPKTPAANSCRRMAPAVSARRKVEAQKEEVSVQRVYSTR 188

Query: 314 RSVRLAKKNV 343
           +S+RL +K++
Sbjct: 189 QSLRLLEKSM 198


>ref|XP_002331774.1| predicted protein [Populus trichocarpa] gi|222875001|gb|EEF12132.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
 Frame = +2

Query: 11  TRRRNVAKEPETEKPSARAPHTARRTV---------AKNAEETPAVVPQSNTRKGAIASA 163
           TRR+ +  EPE+ KP  R   T R TV           N  ETP ++  +   + + ASA
Sbjct: 76  TRRKPLRIEPESSKPLTRTRCTTRGTVVGEGDQENKTANLSETPIML--ARRIRTSTASA 133

Query: 164 YRKMDSELKECME-EEKKDVLVTPAPSN-------LASRRRRGAKEESVVKPPVYSTRRS 319
             KM+S+  E +E +EK +V  TPA  +       +++R +  A+ E      VYSTR S
Sbjct: 134 RHKMESKSMESVENQEKNNVPKTPAARSSRRRAPAVSARGKLEAQNEEKSVQRVYSTRHS 193

Query: 320 VRLAKKNVE 346
           VRL +K +E
Sbjct: 194 VRLLEKGME 202


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