BLASTX nr result

ID: Scutellaria24_contig00024843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024843
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265950.2| PREDICTED: putative hydroxymethylpyrimidine/...    94   1e-17
emb|CBI29762.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_003592983.1| Thiamine-phosphate pyrophosphorylase [Medica...    87   1e-15
ref|XP_002304056.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
gb|ABK95478.1| unknown [Populus trichocarpa]                           86   3e-15

>ref|XP_002265950.2| PREDICTED: putative hydroxymethylpyrimidine/phosphomethylpyrimidine
           kinase 2-like [Vitis vinifera]
          Length = 681

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/91 (57%), Positives = 61/91 (67%), Gaps = 18/91 (19%)
 Frame = +1

Query: 88  SRGFHMTRVSNLR---------------AIQQQEEPI---NSGKMRVPHVLTVAGSDSGA 213
           S+GF   R+S L                 + Q++ P    +  KM++PHVLTVAGSDSGA
Sbjct: 141 SQGFAQYRISRLHFANSRSNRSFRTKIFTVMQEDRPSTVKDDSKMKIPHVLTVAGSDSGA 200

Query: 214 GAGIQADLKACSARVVYCSTVITAVTAQNTV 306
           GAGIQADLKAC+AR VYCSTVITAVTAQNTV
Sbjct: 201 GAGIQADLKACAARGVYCSTVITAVTAQNTV 231


>emb|CBI29762.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = +1

Query: 166 MRVPHVLTVAGSDSGAGAGIQADLKACSARVVYCSTVITAVTAQNTV 306
           M++PHVLTVAGSDSGAGAGIQADLKAC+AR VYCSTVITAVTAQNTV
Sbjct: 1   MKIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTV 47


>ref|XP_003592983.1| Thiamine-phosphate pyrophosphorylase [Medicago truncatula]
           gi|355482031|gb|AES63234.1| Thiamine-phosphate
           pyrophosphorylase [Medicago truncatula]
          Length = 576

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/77 (61%), Positives = 53/77 (68%)
 Frame = +1

Query: 76  HHQLSRGFHMTRVSNLRAIQQQEEPINSGKMRVPHVLTVAGSDSGAGAGIQADLKACSAR 255
           +HQ  R   M       +I       +S   ++PHVLTVAGSDSGAGAGIQADLK CSAR
Sbjct: 50  NHQTPRFVKMQSNITSNSIPTPIHTFDSELNKIPHVLTVAGSDSGAGAGIQADLKTCSAR 109

Query: 256 VVYCSTVITAVTAQNTV 306
            VYCSTVITAVTAQNT+
Sbjct: 110 RVYCSTVITAVTAQNTL 126


>ref|XP_002304056.1| predicted protein [Populus trichocarpa] gi|222841488|gb|EEE79035.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = +1

Query: 157 SGKMRVPHVLTVAGSDSGAGAGIQADLKACSARVVYCSTVITAVTAQNTV 306
           +G   VPHVL+VAGSDSGAGAGIQADLKACSAR VYCSTVIT+VTAQNTV
Sbjct: 5   NGGASVPHVLSVAGSDSGAGAGIQADLKACSARGVYCSTVITSVTAQNTV 54


>gb|ABK95478.1| unknown [Populus trichocarpa]
          Length = 531

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = +1

Query: 85  LSRGFHMTRVSNLRAIQQQEEPINSGKMRVPHVLTVAGSDSGAGAGIQADLKACSARVVY 264
           LS  F   +   + + + QE+   +G   +PHVL+VAGSDSGAGAGIQADLKAC+AR VY
Sbjct: 8   LSNSFSFYQKRIVMSSRMQEK---NGGASIPHVLSVAGSDSGAGAGIQADLKACAARGVY 64

Query: 265 CSTVITAVTAQNTV 306
           CSTVIT+VTAQNTV
Sbjct: 65  CSTVITSVTAQNTV 78


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