BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024842
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   155   2e-69
ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...   154   5e-68
ref|XP_003610936.1| Pentatricopeptide repeat-containing protein ...   150   4e-63
ref|XP_002888839.1| pentatricopeptide repeat-containing protein ...   127   3e-58
ref|NP_177305.1| pentatricopeptide repeat-containing protein [Ar...   130   5e-58

>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  155 bits (392), Expect(2) = 2e-69
 Identities = 73/123 (59%), Positives = 95/123 (77%)
 Frame = +1

Query: 10  LLFKNALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQT 189
           L   N+LVSMY K G+L TAR +F  +L +D+VSWN++IS YAS+GMW EAF+LF  M+ 
Sbjct: 229 LFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRV 288

Query: 190 AGMELNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDPVAVIIGLSACSHLCALKL 369
            G+ELNIITWNT+AGGC+++GNF+ ALEL+  MR    D+D VA IIGL ACSH+ A+KL
Sbjct: 289 EGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKL 348

Query: 370 DRQ 378
            R+
Sbjct: 349 GRE 351



 Score =  133 bits (335), Expect(2) = 2e-69
 Identities = 60/91 (65%), Positives = 75/91 (82%)
 Frame = +3

Query: 372 STEAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRPNYVTLAGILPLCARSANLKH 551
           ST  K++ITWNS+++G+   DR+EEA FLFRE+LL GI PNYVT+A ILPLCAR ANL+H
Sbjct: 390 STRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQH 449

Query: 552 GKELHCYIARHAEFQVHQLLWNALIDIYARS 644
           GKE HCYI R A F+ + LLWN+L+D+YARS
Sbjct: 450 GKEFHCYILRRAGFKDYLLLWNSLVDMYARS 480



 Score = 61.2 bits (147), Expect(2) = 8e-14
 Identities = 30/88 (34%), Positives = 47/88 (53%)
 Frame = +1

Query: 19  KNALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGM 198
           KNAL++MY +C  L  A ++F     K+ ++WNS++S Y      +EA  LF  M  +G+
Sbjct: 368 KNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGI 427

Query: 199 ELNIITWNTVAGGCLRTGNFKRALELIC 282
           E N +T  ++   C R  N +   E  C
Sbjct: 428 EPNYVTIASILPLCARVANLQHGKEFHC 455



 Score = 41.2 bits (95), Expect(2) = 8e-14
 Identities = 20/64 (31%), Positives = 35/64 (54%)
 Frame = +3

Query: 372 STEAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRPNYVTLAGILPLCARSANLKH 551
           S   +  +T+ S+IAG+       EA+ LF E+    I+P++VT+  +L  C+ S  +  
Sbjct: 492 SISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTE 551

Query: 552 GKEL 563
           G +L
Sbjct: 552 GIKL 555



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 28/90 (31%), Positives = 51/90 (56%)
 Frame = +1

Query: 7   FLLFKNALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQ 186
           +LL  N+LV MY + G +  A+ +F+ +  +DEV++ S+I+ Y  +G   EA KLF+ M+
Sbjct: 466 YLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMK 525

Query: 187 TAGMELNIITWNTVAGGCLRTGNFKRALEL 276
              ++ + +T   V   C  +G     ++L
Sbjct: 526 KRHIKPDHVTMVAVLSACSHSGLVTEGIKL 555


>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  154 bits (389), Expect(2) = 5e-68
 Identities = 72/123 (58%), Positives = 97/123 (78%)
 Frame = +1

Query: 10  LLFKNALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQT 189
           L   NALVSMYG+ G LE AR +F+ +  +D VSWN+IIS YASRG+W EAF+LF SMQ 
Sbjct: 217 LFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQE 276

Query: 190 AGMELNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDPVAVIIGLSACSHLCALKL 369
            G+E+N+I WNT+AGGCL +GNF+ AL+LI QMR  +H LD +A+++GL+ACSH+ A+KL
Sbjct: 277 EGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIH-LDAIAMVVGLNACSHIGAIKL 335

Query: 370 DRQ 378
            ++
Sbjct: 336 GKE 338



 Score =  129 bits (325), Expect(2) = 5e-68
 Identities = 56/90 (62%), Positives = 73/90 (81%)
 Frame = +3

Query: 375 TEAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRPNYVTLAGILPLCARSANLKHG 554
           TE K LITWN++++G+A  DR EE  FLFRE+L  G+ PNYVT+A +LPLCAR ANL+HG
Sbjct: 378 TEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHG 437

Query: 555 KELHCYIARHAEFQVHQLLWNALIDIYARS 644
           KE HCYI +H +F+ + LLWNAL+D+Y+RS
Sbjct: 438 KEFHCYIMKHKQFEEYLLLWNALVDMYSRS 467



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/88 (36%), Positives = 48/88 (54%)
 Frame = +1

Query: 19  KNALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGM 198
           KNAL++MY +C DL  A  +F++   K  ++WN+++S YA    ++E   LF  M   GM
Sbjct: 355 KNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGM 414

Query: 199 ELNIITWNTVAGGCLRTGNFKRALELIC 282
           E N +T  +V   C R  N +   E  C
Sbjct: 415 EPNYVTIASVLPLCARIANLQHGKEFHC 442



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 34/103 (33%), Positives = 54/103 (52%)
 Frame = +1

Query: 7   FLLFKNALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQ 186
           +LL  NALV MY + G +  AR +F+ +  +DEV++ S+I  Y  +G  +   KLFE M 
Sbjct: 453 YLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMC 512

Query: 187 TAGMELNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDP 315
              ++ + +T   V   C  +G   +   L  +M I VH + P
Sbjct: 513 KLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRM-IDVHGIVP 554


>ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512271|gb|AES93894.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 812

 Score =  150 bits (379), Expect(2) = 4e-63
 Identities = 73/123 (59%), Positives = 95/123 (77%)
 Frame = +1

Query: 10  LLFKNALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQT 189
           L   NALV MYG+ G LE AR +F+ +  +D+VSWN++IS YASRG+WDEAF+LF  M+ 
Sbjct: 228 LFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMRE 287

Query: 190 AGMELNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDPVAVIIGLSACSHLCALKL 369
           AG+E NII WNT+AGGCL TGNFK AL+L  QMR  V  LD VA+++GL+ACSH+ A+KL
Sbjct: 288 AGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMR-AVIQLDSVAMVVGLNACSHIGAVKL 346

Query: 370 DRQ 378
            ++
Sbjct: 347 GKE 349



 Score =  117 bits (293), Expect(2) = 4e-63
 Identities = 52/90 (57%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
 Frame = +3

Query: 378 EAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRPNYVTLAGILPLCARSANLKHGK 557
           + K LITWN++++GFA  DR+EE  FL RE+L  G+ PNYVT+A ILPLCAR ANL+HGK
Sbjct: 390 DEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGK 449

Query: 558 ELHCY-IARHAEFQVHQLLWNALIDIYARS 644
           E HCY + R  +F+ + LLWN+L+++Y+RS
Sbjct: 450 EFHCYMVKREEQFKGYLLLWNSLVEMYSRS 479



 Score = 58.2 bits (139), Expect(2) = 3e-09
 Identities = 29/90 (32%), Positives = 46/90 (51%)
 Frame = +1

Query: 19  KNALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGM 198
           KN L++MY +C DL  A  +F K+  K  ++WN+++S +A     +E   L   M   G+
Sbjct: 366 KNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGV 425

Query: 199 ELNIITWNTVAGGCLRTGNFKRALELICQM 288
           E N +T  ++   C R  N +   E  C M
Sbjct: 426 EPNYVTIASILPLCARIANLQHGKEFHCYM 455



 Score = 28.9 bits (63), Expect(2) = 3e-09
 Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 31/116 (26%)
 Frame = +3

Query: 390 LITWNSI-------------------------------IAGFAQHDRTEEAMFLFRELLL 476
           L+ WNS+                               I G+      E A+ LF E+  
Sbjct: 466 LLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRR 525

Query: 477 MGIRPNYVTLAGILPLCARSANLKHGKELHCYIARHAEFQVHQLLWNALIDIYARS 644
           + I+P++VT+  +L  C+ S  +  G+ L   +            ++ ++D++ R+
Sbjct: 526 LNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRA 581



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 34/103 (33%), Positives = 55/103 (53%)
 Frame = +1

Query: 7   FLLFKNALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQ 186
           +LL  N+LV MY + G +  AR +F+ +  KDEV++ S+I  Y   G  + A KLF  M+
Sbjct: 465 YLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMR 524

Query: 187 TAGMELNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDP 315
              ++ + +T   V   C  +G   +   L  +M I V+ +DP
Sbjct: 525 RLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKM-IEVYGIDP 566


>ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334680|gb|EFH65098.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 682

 Score =  127 bits (318), Expect(2) = 3e-58
 Identities = 60/119 (50%), Positives = 89/119 (74%)
 Frame = +1

Query: 22  NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 201
           NAL+SMY + G++  AR +F+ +  +D VSWN++I+ YAS GMW EAF+LF+ M+ +G+E
Sbjct: 184 NALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVGMWSEAFELFDKMRFSGVE 243

Query: 202 LNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDPVAVIIGLSACSHLCALKLDRQ 378
           +++ITWN ++GG L TGN+  AL LI +MR     LDPVA+IIGL ACS + A++L ++
Sbjct: 244 VSVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKE 302



 Score =  124 bits (311), Expect(2) = 3e-58
 Identities = 55/90 (61%), Positives = 73/90 (81%)
 Frame = +3

Query: 375 TEAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRPNYVTLAGILPLCARSANLKHG 554
           TE  SL TWNSII+G+AQ +++EEA +L RE+LL G +PN++TLA ILPLCAR ANL+HG
Sbjct: 342 TEENSLCTWNSIISGYAQVNKSEEASYLLREMLLAGFQPNFITLASILPLCARIANLQHG 401

Query: 555 KELHCYIARHAEFQVHQLLWNALIDIYARS 644
           KE HCYI R   F+ + +LWN+L+D+YA+S
Sbjct: 402 KEFHCYILRRKCFKDYTMLWNSLVDVYAKS 431



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 33/88 (37%), Positives = 43/88 (48%)
 Frame = +1

Query: 19  KNALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGM 198
           +N L++MY KC DL  A  +F K       +WNSIIS YA     +EA  L   M  AG 
Sbjct: 319 RNTLITMYSKCDDLRNAFIVFQKTEENSLCTWNSIISGYAQVNKSEEASYLLREMLLAGF 378

Query: 199 ELNIITWNTVAGGCLRTGNFKRALELIC 282
           + N IT  ++   C R  N +   E  C
Sbjct: 379 QPNFITLASILPLCARIANLQHGKEFHC 406


>ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g71490 gi|12323739|gb|AAG51835.1|AC016163_24 unknown
           protein; 40702-42747 [Arabidopsis thaliana]
           gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis
           thaliana] gi|56790238|gb|AAW30036.1| At1g71490
           [Arabidopsis thaliana] gi|332197086|gb|AEE35207.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 681

 Score =  130 bits (328), Expect(2) = 5e-58
 Identities = 60/119 (50%), Positives = 90/119 (75%)
 Frame = +1

Query: 22  NALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGME 201
           NAL+SMY +  ++  AR +F+++  +D VSWN++I+ YAS GMW EAF+LF+ M  +G+E
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242

Query: 202 LNIITWNTVAGGCLRTGNFKRALELICQMRIRVHDLDPVAVIIGLSACSHLCALKLDRQ 378
           +++ITWN ++GGCL+TGN+  AL LI +MR     LDPVA+IIGL ACS + A++L ++
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKE 301



 Score =  119 bits (299), Expect(2) = 5e-58
 Identities = 54/90 (60%), Positives = 71/90 (78%)
 Frame = +3

Query: 375 TEAKSLITWNSIIAGFAQHDRTEEAMFLFRELLLMGIRPNYVTLAGILPLCARSANLKHG 554
           TE  SL TWNSII+G+AQ +++EEA  L RE+L+ G +PN +TLA ILPLCAR ANL+HG
Sbjct: 341 TEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHG 400

Query: 555 KELHCYIARHAEFQVHQLLWNALIDIYARS 644
           KE HCYI R   F+ + +LWN+L+D+YA+S
Sbjct: 401 KEFHCYILRRKCFKDYTMLWNSLVDVYAKS 430



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/88 (36%), Positives = 43/88 (48%)
 Frame = +1

Query: 19  KNALVSMYGKCGDLETARSIFNKVLVKDEVSWNSIISTYASRGMWDEAFKLFESMQTAGM 198
           +N L++MY KC DL  A  +F +       +WNSIIS YA     +EA  L   M  AG 
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGF 377

Query: 199 ELNIITWNTVAGGCLRTGNFKRALELIC 282
           + N IT  ++   C R  N +   E  C
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHC 405