BLASTX nr result

ID: Scutellaria24_contig00024840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024840
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]         460   e-127
ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vin...   452   e-125
ref|XP_002306988.1| glutamate-gated kainate-type ion channel rec...   451   e-124
ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinu...   449   e-124
emb|CAN72607.1| hypothetical protein VITISV_021339 [Vitis vinifera]   439   e-121

>dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]
          Length = 808

 Score =  460 bits (1183), Expect = e-127
 Identities = 229/322 (71%), Positives = 267/322 (82%), Gaps = 1/322 (0%)
 Frame = -2

Query: 966 SIGLNVNASARPAVVNVGAIFTIDSTIGRVAKIAIEEAVKDVNSNSSVLNGTKLHVEFRN 787
           S GL+ N ++RPAVV+VGAIFT DSTIGR AKIAI+EAVKDVNSNSS+L GTKL V+ +N
Sbjct: 23  SDGLSRNGTSRPAVVSVGAIFTFDSTIGRAAKIAIQEAVKDVNSNSSILQGTKLVVQLQN 82

Query: 786 SNCSGFLGLVEALRFMETDVLAVIGPQSSVVAHTILHVANELTTPFLSFAATDPTLSSLQ 607
           SNCSGFLG+V AL+FMETDV+AVIGPQSSVVAHTI HVANEL  PFLSFAATDPTLSSLQ
Sbjct: 83  SNCSGFLGMVGALKFMETDVVAVIGPQSSVVAHTISHVANELQVPFLSFAATDPTLSSLQ 142

Query: 606 FPYFIRTTQSDLYQMTAVAELVDHYGWKEVIVIFLDDDYGRNGLSXXXXXXXXXRCRVSY 427
           FPYF+RTTQSDLYQMTA+AE+++ Y WKEVI IF+DDDYGRNG+S         RCR+SY
Sbjct: 143 FPYFLRTTQSDLYQMTAIAEIIEFYAWKEVIAIFIDDDYGRNGVSALDDALATRRCRISY 202

Query: 426 KAGIPPG-DVSRSGIMDILIKVALMESHIIVLHTYPSTGFTVFSVAQYLGMMNDGYVWIT 250
           K GI PG  V+R  +MD+++KVALMES +IVLH Y   G  V SVA YLGMM DGYVWI+
Sbjct: 203 KVGISPGATVTRGDVMDVMVKVALMESRVIVLHAYRKLGLMVLSVAHYLGMMGDGYVWIS 262

Query: 249 TDWLSSSLDSASPFHSGAMTESMQGVLVLRQHIPDSERKRAFLRRWNKLTHGSIGLSTYG 70
           TDWL++ LDS+ P     M ++MQGVLVLRQH P+S+ KRAF  RWNKLT G +GL++Y 
Sbjct: 263 TDWLTTVLDSSPPLPQDTM-DTMQGVLVLRQHTPESKNKRAFSSRWNKLTGGLLGLNSYA 321

Query: 69  LYAYDTVWLVAHAIDSFFSQGG 4
           L+AYDTVWLVAHAIDSFF+QGG
Sbjct: 322 LHAYDTVWLVAHAIDSFFNQGG 343


>ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vinifera]
            gi|297745576|emb|CBI40741.3| unnamed protein product
            [Vitis vinifera]
          Length = 934

 Score =  452 bits (1163), Expect = e-125
 Identities = 227/339 (66%), Positives = 273/339 (80%), Gaps = 1/339 (0%)
 Frame = -2

Query: 1017 MALFFVLLLWAIFQDGLSIGLNVNASARPAVVNVGAIFTIDSTIGRVAKIAIEEAVKDVN 838
            M + ++L L  +    LS G   N S+RPAVVNVGA+FT +STIGRVAKIAIEEAVKDVN
Sbjct: 1    MNVIWLLSLLFLCFGVLSNGSQKNLSSRPAVVNVGAVFTFESTIGRVAKIAIEEAVKDVN 60

Query: 837  SNSSVLNGTKLHVEFRNSNCSGFLGLVEALRFMETDVLAVIGPQSSVVAHTILHVANELT 658
            S++ VL GTK  +  RNSNCSGF+G++ AL+FMET+ +A+IGPQSSVVAH I HVANEL 
Sbjct: 61   SDAGVLTGTKFVLTMRNSNCSGFIGMIGALQFMETETIAIIGPQSSVVAHMISHVANELQ 120

Query: 657  TPFLSFAATDPTLSSLQFPYFIRTTQSDLYQMTAVAELVDHYGWKEVIVIFLDDDYGRNG 478
             P LSFAATDPTLSSLQFP+F+RTTQSDLYQM A+ ELVD+YGW+ VI IF+DDDYGRNG
Sbjct: 121  VPLLSFAATDPTLSSLQFPFFVRTTQSDLYQMKAITELVDYYGWRSVIAIFIDDDYGRNG 180

Query: 477  LSXXXXXXXXXRCRVSYKAGIPPG-DVSRSGIMDILIKVALMESHIIVLHTYPSTGFTVF 301
            +S         R ++S+K GIPPG   S+  IMDIL+KV+++ES IIVLH  P  GF VF
Sbjct: 181  VSALDDALAEKRLKISHKEGIPPGASASQGDIMDILVKVSVLESRIIVLHVNPDIGFKVF 240

Query: 300  SVAQYLGMMNDGYVWITTDWLSSSLDSASPFHSGAMTESMQGVLVLRQHIPDSERKRAFL 121
            SVA+YLGMM +GYVWI TDWLSS LD++SP  S  M +SMQGVLVLR+H PDS+RKRAFL
Sbjct: 241  SVARYLGMMQNGYVWIATDWLSSVLDTSSPLASDTM-DSMQGVLVLRRHTPDSDRKRAFL 299

Query: 120  RRWNKLTHGSIGLSTYGLYAYDTVWLVAHAIDSFFSQGG 4
             RW KLT GS+GL++YGLYAYDTVWL+AHA+D+FF+QGG
Sbjct: 300  SRWKKLTGGSLGLNSYGLYAYDTVWLLAHALDAFFNQGG 338


>ref|XP_002306988.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222856437|gb|EEE93984.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 897

 Score =  451 bits (1160), Expect = e-124
 Identities = 217/321 (67%), Positives = 265/321 (82%), Gaps = 1/321 (0%)
 Frame = -2

Query: 960 GLNVNASARPAVVNVGAIFTIDSTIGRVAKIAIEEAVKDVNSNSSVLNGTKLHVEFRNSN 781
           G + N S+RPAVVN+GAIFT +STIGRVAKIAI+EAVKDVN+NSS+L+GT+L +  +NSN
Sbjct: 11  GYSRNVSSRPAVVNIGAIFTFESTIGRVAKIAIQEAVKDVNANSSILHGTELKIHMKNSN 70

Query: 780 CSGFLGLVEALRFMETDVLAVIGPQSSVVAHTILHVANELTTPFLSFAATDPTLSSLQFP 601
           CSGFLGL EAL+F E DV+A+IGPQSSVVAH I HVANEL  P LSFAATDPTL+SLQFP
Sbjct: 71  CSGFLGLAEALKFTENDVIAIIGPQSSVVAHIISHVANELQVPLLSFAATDPTLNSLQFP 130

Query: 600 YFIRTTQSDLYQMTAVAELVDHYGWKEVIVIFLDDDYGRNGLSXXXXXXXXXRCRVSYKA 421
           +F+RTTQSD YQM A++E+VDHYGWK+V  IF+D+DYGRNG+S         RCR+SYK 
Sbjct: 131 FFVRTTQSDFYQMAAISEVVDHYGWKQVTAIFIDNDYGRNGVSALGDRLAERRCRISYKV 190

Query: 420 GIPP-GDVSRSGIMDILIKVALMESHIIVLHTYPSTGFTVFSVAQYLGMMNDGYVWITTD 244
           GIPP   V+R  IMDIL+KVALMES ++++H YP  GF +FS+A +L MM +G+VWI TD
Sbjct: 191 GIPPDSGVNRGDIMDILVKVALMESRVVIVHVYPDMGFKIFSMANHLEMMGNGWVWIATD 250

Query: 243 WLSSSLDSASPFHSGAMTESMQGVLVLRQHIPDSERKRAFLRRWNKLTHGSIGLSTYGLY 64
           WLSS LDSASP  S  M +S+QGVLVLRQH PDS+R RAF  RW+KLT G +GL +YGLY
Sbjct: 251 WLSSVLDSASPLPSETM-DSVQGVLVLRQHTPDSDRNRAFSSRWHKLTGGYLGLHSYGLY 309

Query: 63  AYDTVWLVAHAIDSFFSQGGV 1
           AYD+VWL+AHA+D+FF+QGG+
Sbjct: 310 AYDSVWLIAHALDAFFNQGGI 330


>ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223551404|gb|EEF52890.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 927

 Score =  449 bits (1156), Expect = e-124
 Identities = 222/336 (66%), Positives = 269/336 (80%), Gaps = 1/336 (0%)
 Frame = -2

Query: 1005 FVLLLWAIFQDGLSIGLNVNASARPAVVNVGAIFTIDSTIGRVAKIAIEEAVKDVNSNSS 826
            F  L + +F  G S     NA +RPAVV++GAIFT+DSTIGRVAK+AIEEAVKDVN+NSS
Sbjct: 9    FFFLFFGLFSSGYSR----NAISRPAVVSIGAIFTLDSTIGRVAKVAIEEAVKDVNANSS 64

Query: 825  VLNGTKLHVEFRNSNCSGFLGLVEALRFMETDVLAVIGPQSSVVAHTILHVANELTTPFL 646
            +L+GT+L +  +NSNCSGF G+VEALRFMETDV+A++GPQSSVVAHTI HV NEL  P L
Sbjct: 65   ILHGTRLALHIQNSNCSGFSGMVEALRFMETDVVAILGPQSSVVAHTISHVVNELQVPLL 124

Query: 645  SFAATDPTLSSLQFPYFIRTTQSDLYQMTAVAELVDHYGWKEVIVIFLDDDYGRNGLSXX 466
            SFAATDPTL+SLQFP+F+RTTQSDLYQM A+AE+VDHY WK+VI IF+DD +GRNG+   
Sbjct: 125  SFAATDPTLTSLQFPFFVRTTQSDLYQMAAIAEIVDHYSWKQVIAIFIDDHFGRNGILAL 184

Query: 465  XXXXXXXRCRVSYKAGI-PPGDVSRSGIMDILIKVALMESHIIVLHTYPSTGFTVFSVAQ 289
                   RCR+SYK GI P  +V++  IMDIL+KVALMES +I+LH     GFTVFSVA+
Sbjct: 185  SDKLAVRRCRISYKVGIEPEAEVNKGNIMDILVKVALMESRVIILHLNSKLGFTVFSVAK 244

Query: 288  YLGMMNDGYVWITTDWLSSSLDSASPFHSGAMTESMQGVLVLRQHIPDSERKRAFLRRWN 109
            YLGMM +GYVWI TDWLSS LD+ SP  S  M ++MQGVL LRQH P S+RKR+F   W+
Sbjct: 245  YLGMMGNGYVWIATDWLSSFLDTFSPLPSETM-DTMQGVLALRQHTPQSDRKRSFSSAWS 303

Query: 108  KLTHGSIGLSTYGLYAYDTVWLVAHAIDSFFSQGGV 1
            KLT GS GL++YGLYAYD+VWL+AHAID+F  QGG+
Sbjct: 304  KLTGGSFGLNSYGLYAYDSVWLIAHAIDAFLDQGGI 339


>emb|CAN72607.1| hypothetical protein VITISV_021339 [Vitis vinifera]
          Length = 916

 Score =  439 bits (1128), Expect = e-121
 Identities = 215/309 (69%), Positives = 257/309 (83%), Gaps = 1/309 (0%)
 Frame = -2

Query: 927 VVNVGAIFTIDSTIGRVAKIAIEEAVKDVNSNSSVLNGTKLHVEFRNSNCSGFLGLVEAL 748
           +VNVGA+FT +STIGRVAKIAIEEAVKDVNS++ VL GTK  +  RNSNCSGF+G++ AL
Sbjct: 13  IVNVGAVFTFESTIGRVAKIAIEEAVKDVNSDAGVLTGTKFVLTMRNSNCSGFIGMIGAL 72

Query: 747 RFMETDVLAVIGPQSSVVAHTILHVANELTTPFLSFAATDPTLSSLQFPYFIRTTQSDLY 568
           +FMET+ +A+IGPQSSVVAH I HVANEL  P LSFAATDPTLSSLQFP+F+RTTQSDLY
Sbjct: 73  QFMETETIAIIGPQSSVVAHMISHVANELQVPLLSFAATDPTLSSLQFPFFVRTTQSDLY 132

Query: 567 QMTAVAELVDHYGWKEVIVIFLDDDYGRNGLSXXXXXXXXXRCRVSYKAGIPPG-DVSRS 391
           QM A+ ELVD+YGW+ VI IF+DDDYGRNG+S         R ++S+K GIPPG   S+ 
Sbjct: 133 QMKAITELVDYYGWRSVIAIFIDDDYGRNGVSALDDALAEKRLKISHKEGIPPGASASQG 192

Query: 390 GIMDILIKVALMESHIIVLHTYPSTGFTVFSVAQYLGMMNDGYVWITTDWLSSSLDSASP 211
            IMDIL+KV+++ES IIVLH  P  GF VFSVA+YLGMM +GYVWI TDWLSS LD++SP
Sbjct: 193 DIMDILVKVSVLESRIIVLHVNPDIGFKVFSVARYLGMMQNGYVWIATDWLSSVLDTSSP 252

Query: 210 FHSGAMTESMQGVLVLRQHIPDSERKRAFLRRWNKLTHGSIGLSTYGLYAYDTVWLVAHA 31
             S  M +SMQGVLVLR+H PDS+RKRAFL RW KLT GS+GL++YGLYAYDTVWL+AHA
Sbjct: 253 LASDTM-DSMQGVLVLRRHTPDSDRKRAFLSRWKKLTGGSLGLNSYGLYAYDTVWLLAHA 311

Query: 30  IDSFFSQGG 4
           +D+FF+QGG
Sbjct: 312 LDAFFNQGG 320


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