BLASTX nr result

ID: Scutellaria24_contig00024828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024828
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin...   131   6e-29
ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin...   131   6e-29
emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]   131   6e-29
ref|XP_002309903.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28

>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
           [Vitis vinifera]
          Length = 500

 Score =  131 bits (329), Expect = 6e-29
 Identities = 66/87 (75%), Positives = 74/87 (85%)
 Frame = +1

Query: 169 RLREKEGERDSLIAKILQQEQLEESGRVRRAIASRVQIPETSQGFRYLVKHRQPVTSVAL 348
           R  E+EG+RDSL+A+ILQQEQLEESGRVRR IASRVQ PET   FR LVKHRQ VT+VAL
Sbjct: 113 RAEEREGQRDSLVAQILQQEQLEESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVAL 172

Query: 349 SEDDSRGFSASKDGAIVHWDVESGRSE 429
           SEDD +GFSASKDG IV WDV+SG+ E
Sbjct: 173 SEDDLKGFSASKDGTIVQWDVDSGKGE 199


>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
           [Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
           protein product [Vitis vinifera]
          Length = 519

 Score =  131 bits (329), Expect = 6e-29
 Identities = 66/87 (75%), Positives = 74/87 (85%)
 Frame = +1

Query: 169 RLREKEGERDSLIAKILQQEQLEESGRVRRAIASRVQIPETSQGFRYLVKHRQPVTSVAL 348
           R  E+EG+RDSL+A+ILQQEQLEESGRVRR IASRVQ PET   FR LVKHRQ VT+VAL
Sbjct: 113 RAEEREGQRDSLVAQILQQEQLEESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVAL 172

Query: 349 SEDDSRGFSASKDGAIVHWDVESGRSE 429
           SEDD +GFSASKDG IV WDV+SG+ E
Sbjct: 173 SEDDLKGFSASKDGTIVQWDVDSGKGE 199


>emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]
          Length = 573

 Score =  131 bits (329), Expect = 6e-29
 Identities = 66/87 (75%), Positives = 74/87 (85%)
 Frame = +1

Query: 169 RLREKEGERDSLIAKILQQEQLEESGRVRRAIASRVQIPETSQGFRYLVKHRQPVTSVAL 348
           R  E+EG+RDSL+A+ILQQEQLEESGRVRR IASRVQ PET   FR LVKHRQ VT+VAL
Sbjct: 113 RAEEREGQRDSLVAQILQQEQLEESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVAL 172

Query: 349 SEDDSRGFSASKDGAIVHWDVESGRSE 429
           SEDD +GFSASKDG IV WDV+SG+ E
Sbjct: 173 SEDDLKGFSASKDGTIVQWDVDSGKGE 199


>ref|XP_002309903.1| predicted protein [Populus trichocarpa] gi|222852806|gb|EEE90353.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/89 (69%), Positives = 76/89 (85%)
 Frame = +1

Query: 163 GARLREKEGERDSLIAKILQQEQLEESGRVRRAIASRVQIPETSQGFRYLVKHRQPVTSV 342
           G R+ EKEGERDS +AK L Q+QLE+SGR+RRAIASRVQ PE+  GF  LVKHRQ VT++
Sbjct: 110 GERVFEKEGERDSFVAKKLMQQQLEDSGRLRRAIASRVQKPESVDGFEILVKHRQSVTAI 169

Query: 343 ALSEDDSRGFSASKDGAIVHWDVESGRSE 429
            LS+DDS+GFSASKDG I+HWDV+SG++E
Sbjct: 170 CLSDDDSKGFSASKDGTILHWDVDSGKAE 198


>ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|222855688|gb|EEE93235.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/89 (71%), Positives = 75/89 (84%)
 Frame = +1

Query: 163 GARLREKEGERDSLIAKILQQEQLEESGRVRRAIASRVQIPETSQGFRYLVKHRQPVTSV 342
           G R  EKEGERDS +AK L Q+QLEESGR+RRAIASRVQ PE+  GF  LVKHRQ VT+V
Sbjct: 108 GDREFEKEGERDSSVAKKLMQQQLEESGRLRRAIASRVQKPESVDGFEVLVKHRQSVTAV 167

Query: 343 ALSEDDSRGFSASKDGAIVHWDVESGRSE 429
            LS+DDS+GFSASKDG I+HWDV+SG++E
Sbjct: 168 CLSDDDSKGFSASKDGTILHWDVDSGKAE 196


Top