BLASTX nr result

ID: Scutellaria24_contig00024815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024815
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD03447.1| contains similarity to human PCF11p homolog (GB:A...   115   6e-24
ref|NP_680598.2| PCF11P-similar protein 4 [Arabidopsis thaliana]...   115   6e-24
dbj|BAC43722.1| unknown protein [Arabidopsis thaliana]                115   6e-24
ref|XP_002872717.1| hypothetical protein ARALYDRAFT_490122 [Arab...   114   2e-23
emb|CBI23183.3| unnamed protein product [Vitis vinifera]              113   4e-23

>gb|AAD03447.1| contains similarity to human PCF11p homolog (GB:AF046935)
           [Arabidopsis thaliana]
          Length = 827

 Score =  115 bits (289), Expect = 6e-24
 Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 8/111 (7%)
 Frame = +2

Query: 263 SSKFQNPMPPPIQSD---GVGIK-----PLPPLILDRFRAMVKEREEELRVFGGMAVLPL 418
           S K  NP    I S    G+ ++     P PP +LDRF+A++ +RE+E    GG  VLP 
Sbjct: 3   SEKILNPRLVSINSTSRKGMSVELPQKPPPPPSLLDRFKALLNQREDEFG--GGEEVLPP 60

Query: 419 STDEIVRIYEIVLSELTINSKPIITDLTIIAGEQRAHGEGIAGAICTRIIE 571
           S DEIV++YE+VL ELT NSKPIITDLTIIAGEQR HGEGIA AICTRI+E
Sbjct: 61  SMDEIVQLYEVVLGELTFNSKPIITDLTIIAGEQREHGEGIANAICTRILE 111


>ref|NP_680598.2| PCF11P-similar protein 4 [Arabidopsis thaliana]
           gi|110738131|dbj|BAF00997.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657037|gb|AEE82437.1|
           PCF11P-similar protein 4 [Arabidopsis thaliana]
          Length = 808

 Score =  115 bits (289), Expect = 6e-24
 Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 8/111 (7%)
 Frame = +2

Query: 263 SSKFQNPMPPPIQSD---GVGIK-----PLPPLILDRFRAMVKEREEELRVFGGMAVLPL 418
           S K  NP    I S    G+ ++     P PP +LDRF+A++ +RE+E    GG  VLP 
Sbjct: 3   SEKILNPRLVSINSTSRKGMSVELPQKPPPPPSLLDRFKALLNQREDEFG--GGEEVLPP 60

Query: 419 STDEIVRIYEIVLSELTINSKPIITDLTIIAGEQRAHGEGIAGAICTRIIE 571
           S DEIV++YE+VL ELT NSKPIITDLTIIAGEQR HGEGIA AICTRI+E
Sbjct: 61  SMDEIVQLYEVVLGELTFNSKPIITDLTIIAGEQREHGEGIANAICTRILE 111


>dbj|BAC43722.1| unknown protein [Arabidopsis thaliana]
          Length = 614

 Score =  115 bits (289), Expect = 6e-24
 Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 8/111 (7%)
 Frame = +2

Query: 263 SSKFQNPMPPPIQSD---GVGIK-----PLPPLILDRFRAMVKEREEELRVFGGMAVLPL 418
           S K  NP    I S    G+ ++     P PP +LDRF+A++ +RE+E    GG  VLP 
Sbjct: 3   SEKILNPRLVSINSTSRKGMSVELPQKPPPPPSLLDRFKALLNQREDEFG--GGEEVLPP 60

Query: 419 STDEIVRIYEIVLSELTINSKPIITDLTIIAGEQRAHGEGIAGAICTRIIE 571
           S DEIV++YE+VL ELT NSKPIITDLTIIAGEQR HGEGIA AICTRI+E
Sbjct: 61  SMDEIVQLYEVVLGELTFNSKPIITDLTIIAGEQREHGEGIANAICTRILE 111


>ref|XP_002872717.1| hypothetical protein ARALYDRAFT_490122 [Arabidopsis lyrata subsp.
           lyrata] gi|297318554|gb|EFH48976.1| hypothetical protein
           ARALYDRAFT_490122 [Arabidopsis lyrata subsp. lyrata]
          Length = 809

 Score =  114 bits (284), Expect = 2e-23
 Identities = 59/84 (70%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
 Frame = +2

Query: 323 PLPPLILDRFRAMVKEREEELRVFGGMA-VLPLSTDEIVRIYEIVLSELTINSKPIITDL 499
           P PP +LDRF+A++ +RE+E   FGG   VLP S DEIV++YE+VL ELT NSKPIITDL
Sbjct: 33  PPPPSLLDRFKALLNQREDE---FGGSEEVLPPSMDEIVQLYEVVLGELTFNSKPIITDL 89

Query: 500 TIIAGEQRAHGEGIAGAICTRIIE 571
           TIIAGEQR HGEGIA AICTRI+E
Sbjct: 90  TIIAGEQREHGEGIANAICTRILE 113


>emb|CBI23183.3| unnamed protein product [Vitis vinifera]
          Length = 1003

 Score =  113 bits (282), Expect = 4e-23
 Identities = 57/91 (62%), Positives = 73/91 (80%)
 Frame = +2

Query: 302 SDGVGIKPLPPLILDRFRAMVKEREEELRVFGGMAVLPLSTDEIVRIYEIVLSELTINSK 481
           S+ +  KPL P++ DRF+A++K+RE+ELRV  G  V P +T+EIVR+YEIVLSEL  NSK
Sbjct: 77  SNEISQKPLVPIV-DRFKALLKQREDELRVLSGDDVPPPTTEEIVRLYEIVLSELIFNSK 135

Query: 482 PIITDLTIIAGEQRAHGEGIAGAICTRIIEV 574
           PIITDLTIIAG+ + H +GIA AIC RI+EV
Sbjct: 136 PIITDLTIIAGDHKEHADGIADAICARIVEV 166


Top