BLASTX nr result

ID: Scutellaria24_contig00024812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024812
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat...   240   8e-62
emb|CBI18728.3| unnamed protein product [Vitis vinifera]              240   8e-62
ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat...   237   6e-61
emb|CBI38389.3| unnamed protein product [Vitis vinifera]              237   6e-61
ref|XP_002303023.1| predicted protein [Populus trichocarpa] gi|2...   223   2e-56

>ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  240 bits (613), Expect = 8e-62
 Identities = 111/163 (68%), Positives = 136/163 (83%)
 Frame = +1

Query: 7   RPTNISFIGVLNACSHGGLVDVGFKIFQSMQNDYCIEPQIEHYGCIVDLLGRAGKVDEAY 186
           RPTN++F+GVLNACSHGGLVD GFKIF SM  DY +EPQIEHYGC+VDLLGR G+++EAY
Sbjct: 376 RPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAY 435

Query: 187 NFIQEMKATPDHIIWGSLLSACKAHKRYKLGEQVAKLLLNNHYCDTGTYVLISNFYSSWG 366
           + I+ MK TPDHI+ G+LLSACK HK  +LGEQVAK+L +    D+GTYVL+S+ Y+S G
Sbjct: 436 DLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSG 495

Query: 367 KWNKALSVRGKLKERGIQKEPGSSLIEVDNKIHEFLLGDIRHP 495
           KW +A  VR K+KE G+QKEPG S IEV+N+IHEFLLGD+RHP
Sbjct: 496 KWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHP 538


>emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  240 bits (613), Expect = 8e-62
 Identities = 111/163 (68%), Positives = 136/163 (83%)
 Frame = +1

Query: 7   RPTNISFIGVLNACSHGGLVDVGFKIFQSMQNDYCIEPQIEHYGCIVDLLGRAGKVDEAY 186
           RPTN++F+GVLNACSHGGLVD GFKIF SM  DY +EPQIEHYGC+VDLLGR G+++EAY
Sbjct: 333 RPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAY 392

Query: 187 NFIQEMKATPDHIIWGSLLSACKAHKRYKLGEQVAKLLLNNHYCDTGTYVLISNFYSSWG 366
           + I+ MK TPDHI+ G+LLSACK HK  +LGEQVAK+L +    D+GTYVL+S+ Y+S G
Sbjct: 393 DLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSG 452

Query: 367 KWNKALSVRGKLKERGIQKEPGSSLIEVDNKIHEFLLGDIRHP 495
           KW +A  VR K+KE G+QKEPG S IEV+N+IHEFLLGD+RHP
Sbjct: 453 KWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHP 495


>ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  237 bits (605), Expect = 6e-61
 Identities = 110/163 (67%), Positives = 135/163 (82%)
 Frame = +1

Query: 7   RPTNISFIGVLNACSHGGLVDVGFKIFQSMQNDYCIEPQIEHYGCIVDLLGRAGKVDEAY 186
           RPTN++F+GVLNACSHGGLVD GF+IF SM  DY +EPQIEHYGC+VDLLGR G+++EAY
Sbjct: 376 RPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAY 435

Query: 187 NFIQEMKATPDHIIWGSLLSACKAHKRYKLGEQVAKLLLNNHYCDTGTYVLISNFYSSWG 366
           + I+ MK TPDHI+ G+LLSACK HK  +LGEQVAK L +    D+GTYVL+S+ Y+S G
Sbjct: 436 DLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSG 495

Query: 367 KWNKALSVRGKLKERGIQKEPGSSLIEVDNKIHEFLLGDIRHP 495
           KW +A  VR K+KE G+QKEPG S IEV+N+IHEFLLGD+RHP
Sbjct: 496 KWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHP 538


>emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  237 bits (605), Expect = 6e-61
 Identities = 110/163 (67%), Positives = 135/163 (82%)
 Frame = +1

Query: 7   RPTNISFIGVLNACSHGGLVDVGFKIFQSMQNDYCIEPQIEHYGCIVDLLGRAGKVDEAY 186
           RPTN++F+GVLNACSHGGLVD GF+IF SM  DY +EPQIEHYGC+VDLLGR G+++EAY
Sbjct: 340 RPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAY 399

Query: 187 NFIQEMKATPDHIIWGSLLSACKAHKRYKLGEQVAKLLLNNHYCDTGTYVLISNFYSSWG 366
           + I+ MK TPDHI+ G+LLSACK HK  +LGEQVAK L +    D+GTYVL+S+ Y+S G
Sbjct: 400 DLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSG 459

Query: 367 KWNKALSVRGKLKERGIQKEPGSSLIEVDNKIHEFLLGDIRHP 495
           KW +A  VR K+KE G+QKEPG S IEV+N+IHEFLLGD+RHP
Sbjct: 460 KWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHP 502


>ref|XP_002303023.1| predicted protein [Populus trichocarpa] gi|222844749|gb|EEE82296.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score =  223 bits (567), Expect = 2e-56
 Identities = 102/165 (61%), Positives = 132/165 (80%)
 Frame = +1

Query: 1   GTRPTNISFIGVLNACSHGGLVDVGFKIFQSMQNDYCIEPQIEHYGCIVDLLGRAGKVDE 180
           G  P++++F+GVLNACSHGGL ++GF+IF SM  DY IEPQIEHYGC+VDLLGR G+++E
Sbjct: 345 GFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEE 404

Query: 181 AYNFIQEMKATPDHIIWGSLLSACKAHKRYKLGEQVAKLLLNNHYCDTGTYVLISNFYSS 360
           AY+FI+ MK  PDH++ G+LLSACK H   +L E+VAK L+     D+GTY+L+SN YSS
Sbjct: 405 AYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSS 464

Query: 361 WGKWNKALSVRGKLKERGIQKEPGSSLIEVDNKIHEFLLGDIRHP 495
            GKW +A  VR  ++E GI+KEPG S IEV+N+IHEFLLGD+RHP
Sbjct: 465 SGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHP 509


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