BLASTX nr result

ID: Scutellaria24_contig00024804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024804
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              260   1e-67
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   250   2e-64
emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]   238   9e-61
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              207   2e-51
ref|XP_002321920.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  260 bits (665), Expect = 1e-67
 Identities = 124/212 (58%), Positives = 170/212 (80%), Gaps = 2/212 (0%)
 Frame = +3

Query: 6   MVSRHGIQLAAHIISCFYGDLCSKVCECLLRRGTLSLAQIVRFTEMNKENVVNCLRILIH 185
           M +++G+QLA H+IS  +G+L +KVC+CLLR+GTL+LA ++RFTE+  + V +C+ +LI 
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 186 QNCIQAFAIQQEGAFGEAPRILTQYMALFDNMIHRLRAPKFLQIVSEELGKDCLEIFQGM 365
            NC+QAFAIQQE  FGEAPR++TQYMALF N++HR+R  KFL IVSEEL K+C EI +G+
Sbjct: 61  HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120

Query: 366 IEHGRISVDQIIDGSEGIARRNKASFDVHAVRENFSRLLNARFIERCPAPEPFLAPPSEE 545
           ++HGR++++QI+D ++      +      A+RE+F +L+ A F+ERCPA EPFLAPPSEE
Sbjct: 121 LQHGRLTLEQILDRAKSNQSEGEPVVQ-DALRESFLKLVRAHFVERCPASEPFLAPPSEE 179

Query: 546 DTPAKKRGAKSAKIAE--QTIEQRALAAAAPM 635
           +TPA+KRGAKSAK+ E  QTIEQRA+AAAAPM
Sbjct: 180 ETPARKRGAKSAKLVEEPQTIEQRAIAAAAPM 211


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
           vinifera]
          Length = 511

 Score =  250 bits (638), Expect = 2e-64
 Identities = 122/212 (57%), Positives = 167/212 (78%), Gaps = 2/212 (0%)
 Frame = +3

Query: 6   MVSRHGIQLAAHIISCFYGDLCSKVCECLLRRGTLSLAQIVRFTEMNKENVVNCLRILIH 185
           M +++G+QLA H+IS  +G+L +KVC+CLLR+GTL+LA ++RFTE+  + V +C+ +LI 
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 186 QNCIQAFAIQQEGAFGEAPRILTQYMALFDNMIHRLRAPKFLQIVSEELGKDCLEIFQGM 365
            NC+QAFAIQQ     EAPR++TQYMALF N++HR+R  KFL IVSEEL K+C EI +G+
Sbjct: 61  HNCVQAFAIQQ-----EAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 115

Query: 366 IEHGRISVDQIIDGSEGIARRNKASFDVHAVRENFSRLLNARFIERCPAPEPFLAPPSEE 545
           ++HGR++++QI+D ++   R         A+RE+F +L+ A F+ERCPA EPFLAPPSEE
Sbjct: 116 LQHGRLTLEQILDRAKSNQREPVVQ---DALRESFLKLVRAHFVERCPASEPFLAPPSEE 172

Query: 546 DTPAKKRGAKSAKIAE--QTIEQRALAAAAPM 635
           +TPA+KRGAKSAK+ E  QTIEQRA+AAAAPM
Sbjct: 173 ETPARKRGAKSAKLVEEPQTIEQRAIAAAAPM 204


>emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]
          Length = 721

 Score =  238 bits (606), Expect = 9e-61
 Identities = 110/193 (56%), Positives = 153/193 (79%)
 Frame = +3

Query: 6   MVSRHGIQLAAHIISCFYGDLCSKVCECLLRRGTLSLAQIVRFTEMNKENVVNCLRILIH 185
           M +++G+QLA H+IS  +G+L +KVC+CLLR+GT +LA ++RFTE+  + V +C+ +LI 
Sbjct: 1   MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTXTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 186 QNCIQAFAIQQEGAFGEAPRILTQYMALFDNMIHRLRAPKFLQIVSEELGKDCLEIFQGM 365
            NC+QAFAIQQE  FGEAPR++TQYMALF N++HR+R  KFL IVSEEL K+C EI +G+
Sbjct: 61  HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120

Query: 366 IEHGRISVDQIIDGSEGIARRNKASFDVHAVRENFSRLLNARFIERCPAPEPFLAPPSEE 545
           ++HGR++++QI+D ++   R         A+RE+F +L+ A F+ERCPA EPFLAPPSEE
Sbjct: 121 LQHGRLTLEQILDRAKSNQREPVVQ---DALRESFLKLVRAHFVERCPASEPFLAPPSEE 177

Query: 546 DTPAKKRGAKSAK 584
           +TPA+KRGAKSAK
Sbjct: 178 ETPARKRGAKSAK 190


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  207 bits (526), Expect = 2e-51
 Identities = 102/212 (48%), Positives = 149/212 (70%), Gaps = 3/212 (1%)
 Frame = +3

Query: 6   MVSRHGIQLAAHIISCFYGDLCSKVCECLLRRGTLSLAQIVRFTEMNKENVVNCLRILIH 185
           M   +GI+LA H+IS  +GD  +KVC+CLLR+GTL+L  IVR  +++ + V   L++LI 
Sbjct: 1   MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60

Query: 186 QNCIQAFAIQQEGAFGEAPRILTQYMALFDNMIHRLRAPKFLQIVSEELGKDCLEIFQGM 365
            NC+QAFA++ EG  GE P ++TQYM LFDN++HR+R PK L IVS+EL K+C E+F+  
Sbjct: 61  HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAF 120

Query: 366 IEHGRISVDQIIDGSEGIARRNKASFDVH-AVRENFSRLLNARFIERCPAPEPFLAPPSE 542
           ++HG +++ QI+D     + +N+ +  V  A+R +F++L+NA ++ERCPAP+PFL PP E
Sbjct: 121 LKHGWLTLQQILDRVP--SNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDE 178

Query: 543 EDTPAKKRGAKSAKIAEQTI--EQRALAAAAP 632
           E TPA+K  A SAK  E+    EQ  +A A P
Sbjct: 179 EKTPARKHDANSAKAVEELEIGEQCDIAKATP 210


>ref|XP_002321920.1| predicted protein [Populus trichocarpa] gi|222868916|gb|EEF06047.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score =  206 bits (525), Expect = 2e-51
 Identities = 101/211 (47%), Positives = 151/211 (71%), Gaps = 3/211 (1%)
 Frame = +3

Query: 9   VSRHGIQLAAHIISCFYGDLCSKVCECLLRRGTLSLAQIVRFTEMNKENVVNCLRILIHQ 188
           VS++GI+ A HII+  +G L +KVC+CLL++G L L +IVR+TE+++  V NCL +LI  
Sbjct: 1   VSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQH 60

Query: 189 NCIQAFAIQQEGAFGEAPRILTQYMALFDNMIHRLRAPKFLQIVSEELGKDCLEIFQGMI 368
           NC+Q F +++EG FGE  ++ + YM LFDN++HR+R  KF+ IVS+E  K C+++ + ++
Sbjct: 61  NCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETLL 120

Query: 369 EHGRISVDQIIDGSEGIARRNKASFDVHAVRENFSRLLNARFIERCPAPEPFLAPPSEED 548
           +HGR+S +QI DG     R   +S  + A++EN  +L+ AR++ERCP  EPFLA PSEE+
Sbjct: 121 QHGRLSSEQIFDG----FRDRSSSGGMEALQENMHKLVMARYVERCPISEPFLALPSEEE 176

Query: 549 -TPAKKRGAKSAK--IAEQTIEQRALAAAAP 632
             P ++RGAKSAK  +  +T+EQR L AA P
Sbjct: 177 AAPVRRRGAKSAKAFLEPETLEQRVLVAAVP 207


Top