BLASTX nr result

ID: Scutellaria24_contig00024763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024763
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB97048.1| mitochondrial half-ABC transporter [Arabidopsis ...    75   4e-12
ref|NP_200635.1| ABC transporter B family member 25 [Arabidopsis...    75   4e-12
ref|XP_004154559.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...    74   1e-11
ref|XP_004139927.1| PREDICTED: ABC transporter B family member 2...    74   1e-11
ref|XP_002864559.1| hypothetical protein ARALYDRAFT_495937 [Arab...    73   3e-11

>emb|CAB97048.1| mitochondrial half-ABC transporter [Arabidopsis thaliana]
          Length = 728

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
 Frame = +2

Query: 11  VRTTPSVLKLNAFLSD-FPSKAPQNPGINGDQGFSSSGRALFSTEATPPSKKE-KTTLVR 184
           +RT+P +   NAFLSD  PS +P    I   Q  S     LFST    P +   KT  ++
Sbjct: 52  IRTSPVI---NAFLSDNSPSPSPSPSPIRFVQRSSMLNGRLFSTSTPNPDQTTTKTKEIK 108

Query: 185 NTGAGEDQ-VSSSKIVATIAKYLWMKDNFEFRFRVVAALGLLIGAK 319
            T +  D  ++  KI+ T+A YLWM+DN EFRFRV+AALG L+GAK
Sbjct: 109 TTSSDSDSAMADMKILRTLAGYLWMRDNPEFRFRVIAALGFLVGAK 154


>ref|NP_200635.1| ABC transporter B family member 25 [Arabidopsis thaliana]
           gi|75335558|sp|Q9LVM1.1|AB25B_ARATH RecName: Full=ABC
           transporter B family member 25, mitochondrial; Short=ABC
           transporter ABCB.25; Short=AtABCB25; AltName: Full=ABC
           transporter of the mitochondrion 3; Short=AtATM3;
           Short=Iron-sulfur clusters transporter ATM3; AltName:
           Full=Protein STARIK 1; Flags: Precursor
           gi|9964121|gb|AAG09829.1|AF287699_1 half-molecule ABC
           transporter ATM3 [Arabidopsis thaliana]
           gi|13430844|gb|AAK26044.1|AF360334_1 putative ABC
           transporter protein [Arabidopsis thaliana]
           gi|8777328|dbj|BAA96918.1| ABC transporter-like protein
           [Arabidopsis thaliana] gi|23297027|gb|AAN13224.1|
           putative ABC transporter protein [Arabidopsis thaliana]
           gi|332009644|gb|AED97027.1| ABC transporter B family
           member 25 [Arabidopsis thaliana]
          Length = 728

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
 Frame = +2

Query: 11  VRTTPSVLKLNAFLSD-FPSKAPQNPGINGDQGFSSSGRALFSTEATPPSKKE-KTTLVR 184
           +RT+P +   NAFLSD  PS +P    I   Q  S     LFST    P +   KT  ++
Sbjct: 52  IRTSPVI---NAFLSDNSPSPSPSPSPIRFVQRSSMLNGRLFSTSTPNPDQTTTKTKEIK 108

Query: 185 NTGAGEDQ-VSSSKIVATIAKYLWMKDNFEFRFRVVAALGLLIGAK 319
            T +  D  ++  KI+ T+A YLWM+DN EFRFRV+AALG L+GAK
Sbjct: 109 TTSSDSDSAMADMKILRTLAGYLWMRDNPEFRFRVIAALGFLVGAK 154


>ref|XP_004154559.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member 25,
           mitochondrial-like [Cucumis sativus]
          Length = 764

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
 Frame = +2

Query: 35  KLNAFLSDFPSKAPQNPGINGDQGFSSSGRALFSTEATPPSKKEKTTLVRN----TGAGE 202
           +++AFLSD PS +    G     GF  +GR  FST +   ++   +   +N        E
Sbjct: 91  RVHAFLSD-PSSSSSTKG--SQSGFMLNGRLPFSTSSANGTEAASSPSGKNIKPVNKGSE 147

Query: 203 DQVSSSKIVATIAKYLWMKDNFEFRFRVVAALGLLIGAK 319
            QV+ +KI+ T+A YLWMKDN EFRFRV+ ALG L+GAK
Sbjct: 148 SQVADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGAK 186


>ref|XP_004139927.1| PREDICTED: ABC transporter B family member 25, mitochondrial-like
           [Cucumis sativus]
          Length = 762

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
 Frame = +2

Query: 35  KLNAFLSDFPSKAPQNPGINGDQGFSSSGRALFSTEATPPSKKEKTTLVRN----TGAGE 202
           +++AFLSD PS +    G     GF  +GR  FST +   ++   +   +N        E
Sbjct: 91  RVHAFLSD-PSSSSSTKG--SQSGFMLNGRLPFSTSSANGTEAASSPSGKNIKPVNKGSE 147

Query: 203 DQVSSSKIVATIAKYLWMKDNFEFRFRVVAALGLLIGAK 319
            QV+ +KI+ T+A YLWMKDN EFRFRV+ ALG L+GAK
Sbjct: 148 SQVADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGAK 186


>ref|XP_002864559.1| hypothetical protein ARALYDRAFT_495937 [Arabidopsis lyrata subsp.
           lyrata] gi|297310394|gb|EFH40818.1| hypothetical protein
           ARALYDRAFT_495937 [Arabidopsis lyrata subsp. lyrata]
          Length = 728

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
 Frame = +2

Query: 11  VRTTPSVLKLNAFLSDF-PSKAPQNPGINGDQGFSSSGRALFSTEATPPSKKE-KTTLVR 184
           +RT+P +   NAFLSD  PS +P    I   Q  S     LFST    P +   K+  ++
Sbjct: 52  IRTSPVI---NAFLSDHSPSPSPSPSPIRFVQRSSVLNGRLFSTSTPNPDQAATKSKEIK 108

Query: 185 NTGAGEDQ-VSSSKIVATIAKYLWMKDNFEFRFRVVAALGLLIGAK 319
            T +  D  ++  KI+ T+A YLWM+DN EFRFRV+AALG L+GAK
Sbjct: 109 ITSSDSDSAMADMKILRTLAGYLWMRDNPEFRFRVIAALGFLVGAK 154


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