BLASTX nr result

ID: Scutellaria24_contig00024644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024644
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   246   1e-63
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   243   2e-62
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun...   238   4e-61
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   238   4e-61
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   236   1e-60

>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score =  246 bits (628), Expect = 1e-63
 Identities = 110/128 (85%), Positives = 119/128 (92%)
 Frame = +3

Query: 3   FPVTRKPEDITSITSNGGRVQCMKVWPPINMKKFETLSYLPPLTTEQLAKEVDYLLRSGW 182
           FPVTRK  DITS+ SNGGRVQCMKVWPP+ +KKFETLSYLP LT EQL+KEVDYLLRSGW
Sbjct: 37  FPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGW 96

Query: 183 VPCLEFELEHGFVYREHNKSPGYYDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPSAY 362
           VPCLEFELEHGFVYREH+ SPGYYDGRYW MWKLPMFGCTDSSQVLKE++EC KEYP+AY
Sbjct: 97  VPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAY 156

Query: 363 VRIIGFDN 386
           +RIIGFDN
Sbjct: 157 IRIIGFDN 164


>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  243 bits (619), Expect = 2e-62
 Identities = 107/128 (83%), Positives = 120/128 (93%)
 Frame = +3

Query: 3   FPVTRKPEDITSITSNGGRVQCMKVWPPINMKKFETLSYLPPLTTEQLAKEVDYLLRSGW 182
           FPVTRK  DITS+ SNGGRVQCMKVWPP+ +KKFETLSYLPPLT E+LAKEVDYLLRSGW
Sbjct: 37  FPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLSYLPPLTNEELAKEVDYLLRSGW 96

Query: 183 VPCLEFELEHGFVYREHNKSPGYYDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPSAY 362
           VPCLEFELEHG+VYRE+++SPGYYDGRYW MWKLPMFGCTDSSQVL E++EC KEYP+A+
Sbjct: 97  VPCLEFELEHGWVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLNEVEECKKEYPNAF 156

Query: 363 VRIIGFDN 386
           +RIIGFDN
Sbjct: 157 IRIIGFDN 164


>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus x
           domestica x Pyrus communis]
          Length = 179

 Score =  238 bits (607), Expect = 4e-61
 Identities = 106/128 (82%), Positives = 116/128 (90%)
 Frame = +3

Query: 3   FPVTRKPEDITSITSNGGRVQCMKVWPPINMKKFETLSYLPPLTTEQLAKEVDYLLRSGW 182
           FPVTRK  DITSI SNGGRVQCM+VWPP+ +KKFETLSYLPPL+TE LAKEVDYLLR  W
Sbjct: 35  FPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNW 94

Query: 183 VPCLEFELEHGFVYREHNKSPGYYDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPSAY 362
           VPCLEFELEHGFVYRE+N+SPGYYDGRYW MWKLPMFGCTDSSQVLKEL+E  K YP ++
Sbjct: 95  VPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSF 154

Query: 363 VRIIGFDN 386
           +RIIGFDN
Sbjct: 155 IRIIGFDN 162


>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  238 bits (607), Expect = 4e-61
 Identities = 106/128 (82%), Positives = 116/128 (90%)
 Frame = +3

Query: 3   FPVTRKPEDITSITSNGGRVQCMKVWPPINMKKFETLSYLPPLTTEQLAKEVDYLLRSGW 182
           FPVTRK  DITS+ SNGGRVQCM+VWPP+ +KKFETLSYLPPLT  QLAKE+DYLLRSGW
Sbjct: 37  FPVTRKSNDITSLPSNGGRVQCMQVWPPVGLKKFETLSYLPPLTPTQLAKEIDYLLRSGW 96

Query: 183 VPCLEFELEHGFVYREHNKSPGYYDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPSAY 362
           VPCLEFE E GFVYREH+ SPGYYDGRYW MWKLPMFGCTDS+QVLKEL+EC K YP+A+
Sbjct: 97  VPCLEFETEKGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVLKELEECKKAYPTAF 156

Query: 363 VRIIGFDN 386
           VRIIGFDN
Sbjct: 157 VRIIGFDN 164


>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 179

 Score =  236 bits (603), Expect = 1e-60
 Identities = 108/129 (83%), Positives = 118/129 (91%), Gaps = 1/129 (0%)
 Frame = +3

Query: 3   FPVTRKP-EDITSITSNGGRVQCMKVWPPINMKKFETLSYLPPLTTEQLAKEVDYLLRSG 179
           FPVTRK  EDITS++SNGGRVQCM+VWPPI  KKFETLSYLPPL+ E LAKEVDYLLRSG
Sbjct: 34  FPVTRKSSEDITSLSSNGGRVQCMQVWPPIGKKKFETLSYLPPLSPESLAKEVDYLLRSG 93

Query: 180 WVPCLEFELEHGFVYREHNKSPGYYDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPSA 359
           WVPCLEFELEHGFVYREH+ SPGYYDGRYW MWKLPMFGCTDS+QVLKEL+E  K YP+A
Sbjct: 94  WVPCLEFELEHGFVYREHHSSPGYYDGRYWTMWKLPMFGCTDSAQVLKELEEAKKAYPTA 153

Query: 360 YVRIIGFDN 386
           ++RIIGFDN
Sbjct: 154 FIRIIGFDN 162


Top