BLASTX nr result

ID: Scutellaria24_contig00024629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024629
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323671.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_003605288.1| hypothetical protein MTR_4g028110 [Medicago ...    60   1e-07
ref|XP_002528690.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002323671.1| predicted protein [Populus trichocarpa] gi|222868301|gb|EEF05432.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 21/99 (21%)
 Frame = -2

Query: 256 LNKAMLGRSLSEPAVARRQ---------EPPKAAAVKPG--RRAAGFQKVMRKLFSPILG 110
           LN+A+LGRSLSEP  +R Q           P A  VK G  RR  GF K+++KL  PILG
Sbjct: 31  LNQAILGRSLSEPGASRSQLKGKLNGQDTAPLATHVKQGCRRRGLGFDKLLKKLLRPILG 90

Query: 109 RKGAAKDGGSN----MKHHSMSH------FKTFSRSLRV 23
           RKG    GG       K   M++      +K FSRSLR+
Sbjct: 91  RKGKGDGGGGGAAAAAKKEGMANPKDPKSWKAFSRSLRI 129


>ref|XP_003605288.1| hypothetical protein MTR_4g028110 [Medicago truncatula]
           gi|355506343|gb|AES87485.1| hypothetical protein
           MTR_4g028110 [Medicago truncatula]
          Length = 119

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/90 (45%), Positives = 49/90 (54%), Gaps = 13/90 (14%)
 Frame = -2

Query: 256 LNKAMLGRSLSEPAVARRQE-----------PPKAAAVKPGRRA--AGFQKVMRKLFSPI 116
           LNKAML RSLSEP   R              P     VK GRR   +GF+KV +KLF P 
Sbjct: 31  LNKAMLSRSLSEPRFLRSVSQSRLVNAAPTIPLVTQEVKQGRRCRGSGFRKVFKKLFKPF 90

Query: 115 LGRKGAAKDGGSNMKHHSMSHFKTFSRSLR 26
           LGRK  A+   S+++  +   FK FSRSLR
Sbjct: 91  LGRKNGARK--SDVEFQNPLSFKAFSRSLR 118


>ref|XP_002528690.1| conserved hypothetical protein [Ricinus communis]
           gi|223531862|gb|EEF33679.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 130

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 41/100 (41%), Positives = 53/100 (53%), Gaps = 22/100 (22%)
 Frame = -2

Query: 256 LNKAMLGRSLSEPAVAR--------RQEPPKAAAVK----PGRR---AAGFQKVMRKLFS 122
           LN+AMLGRSLSEP V R        R+ PP  A VK     GRR   + GF ++++KL  
Sbjct: 31  LNQAMLGRSLSEPGVGRSRFQPPLNREAPPPPALVKKQVRQGRRLGGSTGFNRMLKKLLK 90

Query: 121 PILGRKGAAKDGGSN--MKHH-----SMSHFKTFSRSLRV 23
           PI  RKGA K    +  +K       +   +K  SRSLR+
Sbjct: 91  PIFSRKGAKKCAAFDDAVKREVPDPKNAKSWKALSRSLRL 130


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