BLASTX nr result

ID: Scutellaria24_contig00024579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024579
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   178   4e-43
emb|CBI18968.3| unnamed protein product [Vitis vinifera]              178   4e-43
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          176   2e-42
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   169   3e-40
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   165   3e-39

>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
           vinifera]
          Length = 962

 Score =  178 bits (452), Expect = 4e-43
 Identities = 81/119 (68%), Positives = 99/119 (83%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   KNVHFIVERHG-VGARLTSTARITYVTTHWIHSCLEDGCLLDVSSHILYSPLSCKIPLPG 179
           +NVHF+VE HG +  +  + ++ T+V++HWI SCLEDGCLLDVSSHILYSPL C+IPLPG
Sbjct: 581 QNVHFVVECHGALLPKSVNASQTTHVSSHWIRSCLEDGCLLDVSSHILYSPLPCQIPLPG 640

Query: 180 FEGYRLCVSQYDMKPKQLLRNLCYVLGGKFAEKLTKKVTHLLCEYAGGDKYQAACRWGI 356
           FE  R CVSQY+ K + LLRNLC+VLG KF EKLTKKVTHLLC++ GG KY+AAC+WGI
Sbjct: 641 FEKLRFCVSQYEEKDRLLLRNLCFVLGAKFVEKLTKKVTHLLCKFTGGPKYEAACKWGI 699


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  178 bits (452), Expect = 4e-43
 Identities = 81/119 (68%), Positives = 99/119 (83%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   KNVHFIVERHG-VGARLTSTARITYVTTHWIHSCLEDGCLLDVSSHILYSPLSCKIPLPG 179
           +NVHF+VE HG +  +  + ++ T+V++HWI SCLEDGCLLDVSSHILYSPL C+IPLPG
Sbjct: 581 QNVHFVVECHGALLPKSVNASQTTHVSSHWIRSCLEDGCLLDVSSHILYSPLPCQIPLPG 640

Query: 180 FEGYRLCVSQYDMKPKQLLRNLCYVLGGKFAEKLTKKVTHLLCEYAGGDKYQAACRWGI 356
           FE  R CVSQY+ K + LLRNLC+VLG KF EKLTKKVTHLLC++ GG KY+AAC+WGI
Sbjct: 641 FEKLRFCVSQYEEKDRLLLRNLCFVLGAKFVEKLTKKVTHLLCKFTGGPKYEAACKWGI 699


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  176 bits (446), Expect = 2e-42
 Identities = 75/118 (63%), Positives = 92/118 (77%)
 Frame = +3

Query: 3   KNVHFIVERHGVGARLTSTARITYVTTHWIHSCLEDGCLLDVSSHILYSPLSCKIPLPGF 182
           +NVHF +E HGV  R       TYV++HW+HSCLED CLLDV  HI+YSPL C+IP PGF
Sbjct: 574 ENVHFTIECHGVTPRSVDVPETTYVSSHWVHSCLEDKCLLDVGRHIIYSPLPCQIPFPGF 633

Query: 183 EGYRLCVSQYDMKPKQLLRNLCYVLGGKFAEKLTKKVTHLLCEYAGGDKYQAACRWGI 356
             +R C+SQY+ K + LLRNLC+VLG KF EKLT+KVTHLLC++  G+KY+AACRWGI
Sbjct: 634 RNFRFCISQYEGKDRSLLRNLCFVLGAKFVEKLTRKVTHLLCKFTIGEKYEAACRWGI 691


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
           topbp1, putative [Ricinus communis]
          Length = 950

 Score =  169 bits (427), Expect = 3e-40
 Identities = 73/118 (61%), Positives = 92/118 (77%)
 Frame = +3

Query: 3   KNVHFIVERHGVGARLTSTARITYVTTHWIHSCLEDGCLLDVSSHILYSPLSCKIPLPGF 182
           KNV+F +E HG   R    ++ TYV++HW+ SCLED  LLDV  HI+YSPL C+IPLPGF
Sbjct: 573 KNVNFTIECHGTIPRCMGGSQTTYVSSHWVRSCLEDESLLDVGGHIIYSPLPCQIPLPGF 632

Query: 183 EGYRLCVSQYDMKPKQLLRNLCYVLGGKFAEKLTKKVTHLLCEYAGGDKYQAACRWGI 356
           E +R C+SQY+ K + LLRNLC+VLG KF EKLT+KVTHLLC++  G KY+AAC+WGI
Sbjct: 633 ENFRFCISQYEEKDRLLLRNLCFVLGAKFVEKLTRKVTHLLCKFTNGPKYEAACKWGI 690


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine
           max]
          Length = 970

 Score =  165 bits (418), Expect = 3e-39
 Identities = 71/118 (60%), Positives = 91/118 (77%)
 Frame = +3

Query: 3   KNVHFIVERHGVGARLTSTARITYVTTHWIHSCLEDGCLLDVSSHILYSPLSCKIPLPGF 182
           ++ ++ +E HGV   LT  ++  Y+++HWI SCLE G LLDV SHILYSPL C++PLPGF
Sbjct: 601 QSTYYTIECHGVTPTLTRDSKSLYISSHWIRSCLEAGSLLDVDSHILYSPLPCRVPLPGF 660

Query: 183 EGYRLCVSQYDMKPKQLLRNLCYVLGGKFAEKLTKKVTHLLCEYAGGDKYQAACRWGI 356
           E +R C SQYD K + LLRNLC+ LG K+ EKLTKKVTHLLC++  G KY+AAC+WGI
Sbjct: 661 ESFRFCFSQYDEKDRNLLRNLCFHLGAKYGEKLTKKVTHLLCKFTNGPKYEAACKWGI 718



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
 Frame = +3

Query: 6   NVHFIVERHGVGARLTSTARIT---YVTTHWIHSCLEDGCLLDVSSHILYSPLSCKIPLP 176
           +++F+V ++ + A+      I     VT  W+  C ++        H +    S K+ LP
Sbjct: 136 DLNFVVVKNVLAAKYKWALNILKKPIVTYEWLKQCSDE--------HRVVPQESYKV-LP 186

Query: 177 GFEGYRLCVSQYDMKPKQLLRNLCYVLGGKFAEKLTKKVTHLLCEYAGGDKYQAACRWG 353
            F G ++CV+      ++ +  L    GGK++ +LTKK THL+ E   GDKY+ A RWG
Sbjct: 187 -FSGLKICVTGIPADNRKEMEKLILQNGGKYSAELTKKCTHLISEAPEGDKYKVAKRWG 244


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